Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02525 ATGGGAAACACTTGCAGAAAACCAGTTTGTCATGATTCCTCACCAAGTGTATTTGGAAGTACAAAGACTCAAAGTAACACAAATCAGACTTCAAATTCTCCTGACCAAAAAACCGATTCGAAAACTTCATCATCAAATGATGACAAATCGATCTCTAAAGATGTGAAGTCCTTCAGCTTCAATGATCTAAAGGAGGCAACTAGGAACTTCCGGCAAGAAAATTTAATAGGGGAAGGAGGGTTTGGATTCGTCTACAAAGGATGGATAGATGAGAACACTGGTGCTCCTACAAAACCAGGAAATGGAATTGTAGTAGCCATTAAGAAACTTAAACCAGAAAGTTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAAGCTTATTGGATACTGTTCAGAAGGTAAAAACAGGCTTCTGGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCACCTATTCAGAAAAGGTGTTCAACCAATTTCCTGGATGACACGGATCAGTATTGCGGTCGGTGTGGCAAGAGGACTAGCATTCTTACATTCCCTTGATGCAAATGTTATTTATCGTGATTTAAAGGCTGCCAACATCCTACTTGATTCGGACTTCAATGCAAATCTTTCCGATTTCGGCTTGGCAAGAGATGGTCCAACAGGAGATAACACTCATGTTTCAACTAGAATTATTGGGACTCATGGTTATGCCGCCCCGGAGTATGTAGCCACAGGCCATTTAACACTGAGGAGTGATGTATACAGTTTCGGCGTTGTCTTGTTAGAGTTACTAACAGGACGTCGTGTAGTCGAAGATGATAGACAGGTATACACGGAAGAAACATTGGTCGATTGGGCAATGCCTTTCCTGATTGACAGCAGAAGAATATTGAGAATCATGGATACAAAGTTAGGTGGTCAATACTCAAAGAAAGGAGCTCAAGCTGCAGCTGCACTTGTTCTAAAGTGTCTTAATACTGATCCTAAACATAGACCAACCATGGTAAATGTTCTATCTGCATTGGAAGCATTACACTCCTCAAATTCATTCCCAAGGAAACCAAAATCTGGAACTGATAATAATAACAACTCAGTTCCAAGGACACCGAAATCTGGAACTGATAATCATCATGCAACCAAGCATTCTAGTCATCATCATTCACATAAGTCAATTACCAATAATACTAGAAAACATTGA 1227 0.3985 MGNTCRKPVCHDSSPSVFGSTKTQSNTNQTSNSPDQKTDSKTSSSNDDKSISKDVKSFSFNDLKEATRNFRQENLIGEGGFGFVYKGWIDENTGAPTKPGNGIVVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWMTRISIAVGVARGLAFLHSLDANVIYRDLKAANILLDSDFNANLSDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTLRSDVYSFGVVLLELLTGRRVVEDDRQVYTEETLVDWAMPFLIDSRRILRIMDTKLGGQYSKKGAQAAAALVLKCLNTDPKHRPTMVNVLSALEALHSSNSFPRKPKSGTDNNNNSVPRTPKSGTDNHHATKHSSHHHSHKSITNNTRKH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02525 408 PANTHER OS01G0588500 PROTEIN-RELATED 35 355 - -
Mepo7g02525 408 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 365 - -
Mepo7g02525 408 CDD STKc_IRAK 76 354 - -
Mepo7g02525 408 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Mepo7g02525 408 MobiDBLite consensus disorder prediction 356 408 - -
Mepo7g02525 408 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g02525 408 Gene3D Transferase(Phosphotransferase) domain 1 156 374 - -
Mepo7g02525 408 MobiDBLite consensus disorder prediction 1 51 - -
Mepo7g02525 408 MobiDBLite consensus disorder prediction 389 408 - -
Mepo7g02525 408 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Mepo7g02525 408 MobiDBLite consensus disorder prediction 356 382 - -
Mepo7g02525 408 SUPERFAMILY Protein kinase-like (PK-like) 44 357 IPR011009 -
Mepo7g02525 408 Pfam Protein tyrosine and serine/threonine kinase 73 350 IPR001245 GO:0004672|GO:0006468
Mepo7g02525 408 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g02525 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mepo7g02525 408 MobiDBLite consensus disorder prediction 14 40 - -
Mepo7g02525 408 FunFam Serine/threonine-protein kinase BIK1 36 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02525 Mepo-Chr7 36356570 36359440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02525 6 351 Glycoside Hydrolase AT3G07070 47.727 1.53e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo7g02525 PK_Tyr_Ser-Thr 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02525 - - gmx:102664409 611.298