Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02506 ATGCCTTATCCTAAAGGCGAGAATCCTAAGCCTGTATCGCCGGCAGCAGCAGGACAAGGTTTTACTCCACCTGCTCGTGCCATTGATGCCAAACATGTTCAGCCTCCGGTGCAAGGAGATCCGAATGCTTATGCTGTTAATTATCCAAGTGGAAGGCCAAATCCCCAAGAACAAGGTGACCATGTGAATCATGGTCGGCATCATCAAAGACCTTTTCCTGCCAAGGCAAACATGCCTACGCAACACAAAAGCATGGAAGGAAGAAAAAGTATACAATCATCCCTCCTTCAAATTGATTTAAATGGGCCGGCTTCAGTCCAAGATCCCTCTGAGCATATGCATAGCATGGAACAACAACAGGAGAAAACTGGCACCGATATCATTGAGTCGGGTCGTGCCGTTGCAATTCCAAACTCTAATGATAATAACGTCGCAACTCTAAACTCAGACGAAAATAACTTAATTCAAGCTAAGTCAGTACCAGAAGAAAGTCATCCTCCAGGGAGAGTACAGAGGAAAAGCATACATTGGACAGATGATGAACACAAGTTGTTTTTGAAGGGGCTGAAAAAACATGGAAAGGGACACTGGAAAGATATTTCAAAAGATTTTGTGGTGACAAAAACTCCAACTCAAATTGGTAGCCATGCCCAAAAATACTTTATCCACCAAGATGTGAAAGATATAGAGAAGAAGGAGAAAAAGAGAAAAAGTATTCACGACACAACCTTAAACAAGAATGACACATTGGTTACTGTCGCTGTTGAACAGCGAGATGAGATTCCTTCAGTTGAGCTACAAAGTGTGATTCCTCCTCAAGGAATGCAACAGACACAAACACAACAGAATGAGATTTCTCCTATGTTGTTGCGTTGTCCAATCGGTTCTACAATTCCTTCGATTGAGCAACAAAATGAGCTTACTCCTTTAGTCACTACTCCTATGAAACAACAACAAGAGACTCCTGCCATCTTAAACAACAAGGACAATGACAACTTGCAAACCCAACAAATGTATCAGTTGGCGTTGCTTTATCCAATCGGTTCTACACTTCCTGATATGAACAAACTTGAGAAGATGTGCAAGTTGTTGGCAAAAGAACTTTGA 1107 0.4192 MPYPKGENPKPVSPAAAGQGFTPPARAIDAKHVQPPVQGDPNAYAVNYPSGRPNPQEQGDHVNHGRHHQRPFPAKANMPTQHKSMEGRKSIQSSLLQIDLNGPASVQDPSEHMHSMEQQQEKTGTDIIESGRAVAIPNSNDNNVATLNSDENNLIQAKSVPEESHPPGRVQRKSIHWTDDEHKLFLKGLKKHGKGHWKDISKDFVVTKTPTQIGSHAQKYFIHQDVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPMLLRCPIGSTIPSIEQQNELTPLVTTPMKQQQETPAILNNKDNDNLQTQQMYQLALLYPIGSTLPDMNKLEKMCKLLAKEL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02506 368 NCBIfam myb-like DNA-binding domain, SHAQKYF class 173 224 IPR006447 GO:0003677
Mepo7g02506 368 Pfam Myb-like DNA-binding domain 177 221 IPR001005 -
Mepo7g02506 368 Gene3D - 175 226 - -
Mepo7g02506 368 ProSiteProfiles SANT domain profile. 177 225 IPR017884 -
Mepo7g02506 368 MobiDBLite consensus disorder prediction 1 88 - -
Mepo7g02506 368 MobiDBLite consensus disorder prediction 102 121 - -
Mepo7g02506 368 PANTHER TRANSCRIPTION FACTOR KUA1 62 328 - -
Mepo7g02506 368 CDD SANT 177 221 IPR001005 -
Mepo7g02506 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 177 225 IPR017930 -
Mepo7g02506 368 SMART sant 173 223 IPR001005 -
Mepo7g02506 368 SUPERFAMILY Homeodomain-like 170 224 IPR009057 -
Mepo7g02506 368 ProSiteProfiles Myb-like domain profile. 169 221 IPR001005 -
Mepo7g02506 368 FunFam transcription factor MYB1R1 175 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02506 Mepo-Chr7 36194300 36196282 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo7g02506 Myb_DNA-binding 9.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02506 - K18757 mtr:25495062 587.8