LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g02456	ATGTCAGATGATATGCTAGTGCATTTTTCGTCGAATTCTTCGAACCAATCGGATCAGTCTCTGCCCACAAAGATTGCCAAGTTGGAAGCTCGAATGGTGGGAAAAGGTTCTTCAACTGCTTCTCAGCAACAAGGTTGGCCTTCTGTTTCTTCTGCTGGGAAATTCAGTGGAGTAGCAGCTGAAGAAATGGTTGAGCCTTGTAGTTCAAGTGATTCTGATGATGATAATGGTGCGGATTTCTTGATTCAAGCCAACACACGTAAGCGCTTAAAACCTCACGATGATAACGATGATGTTTCTGAACGTGCTGAGGTTGTTACTGAAGGAAGACAAACTAGTTTGGAGACAAAAAATAATGTTGATGCAAATAGAAAGAAATCTGGTCGTGGAAGAGGGAGTTCTGGTTCAAGCAGAGGTCGTGGTTCCAAATCTAATGATCAGACCAGAACACAAATTTCTTCTTCAACAGTTTCTGCTTCAAATGGTCAGAATGAGAATGATGGTAGACTCAAAGATCCGTTTCGTAATGATAATGGTGCTTCATTAGAGGAGGAAATTGCATCTTTACGTGCAAAAGTTGTTGTGTTGGAGGAAGATTTACGTAAAGCAAAGCAAGAAGCCTCTCAGCATCAGAATATTTGTCCACAGTTAGAAAAGGAACTGAAGGAATTGAAAGATCTTGAGGAGCAAATGAAACCTAAGAGAACAAAAATAATATCCGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACAAGAAGCAAGACTAAAAGTACGACAGGACTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCTTATCTGAGACCTGGGAAGATGGTCAGGCGTTAAAGGATCTGAATGCCCAGCTTAAACAACTACTCGAAACAAAGGAGGCAATTGAGCGCCAGCGCAAGTTATTCAAGAAAAAACAATCTGATAAGGGTGATGGAATAGATGCAGAGGCTGGATTGCTGGAAGATATTCTCATTCACGAGGAAATCTATAAGTCTCGACTAGCCAGCATTAAACGGGAAGAAGAAATTGTTTTGCGAGAGAGGGACCGCTACGAACTAGAAAAGGGAAGACTAATTCGTGAAATGAAACGCATTCGGGATGAAGATGGTTCACGGTTCAACAATTTTCAGATTCTAAACCATCGTTACGCCCTTCTAAACCTTCTTGGAAAGGGAGGATTCAGCGAGGTGTACAAGGCTTTTGATTTGGTGGAGCATAGATATGTTGCATGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATAAGGCATGCAATTCGGGAGTATAATATTCACAAGACCTTGGTCCATCGTCATATTGTTCGTTTATGGGACATCTTTGAGATTGATCCAAATACATTCTGCACTGTTCTAGAGTATTGCAGCGGGAAAGATCTTGATGCTGTTCTTAAAGCAACACCTATATTGCCTGAGAAGGAGGCTAGAGTCATTTTAGTTCAGATTTTCCAAGGCCTTATTTACATGAATAAAAGAGCACTGAAGATTATCCATTATGATTTAAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGTATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATTGTGGAGAATGATGTGGGATCCCAGGGTATGGAACTTACATCCCAGGGGGCTGGAACGTATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACACCTCTTATATCATCCAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTTTATCAAATGCTCTTCGGCAGACGTCCTTTCGGACATGACCAAACACAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCACGCAAGGTTGAATTTCCCTCAAGACCTACTGTTTCTAATGAGGCAAAGGAATTTATACGGCGGTGTCTAACATATAACCAGGCTGAGAGACCAGATGTATTGACCATTGCTCAAGATCCATATCTCACATACGTGAAGAAGTAG	2013	0.4118	MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKGSSTASQQQGWPSVSSAGKFSGVAAEEMVEPCSSSDSDDDNGADFLIQANTRKRLKPHDDNDDVSERAEVVTEGRQTSLETKNNVDANRKKSGRGRGSSGSSRGRGSKSNDQTRTQISSSTVSASNGQNENDGRLKDPFRNDNGASLEEEIASLRAKVVVLEEDLRKAKQEASQHQNICPQLEKELKELKDLEEQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNVGVIRAGTVLSETWEDGQALKDLNAQLKQLLETKEAIERQRKLFKKKQSDKGDGIDAEAGLLEDILIHEEIYKSRLASIKREEEIVLRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDPNTFCTVLEYCSGKDLDAVLKATPILPEKEARVILVQIFQGLIYMNKRALKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTVSNEAKEFIRRCLTYNQAERPDVLTIAQDPYLTYVKK	670

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g02456	670	MobiDBLite	consensus disorder prediction	1	23	-	-
	Mepo7g02456	670	Coils	Coil	179	237	-	-
	Mepo7g02456	670	Gene3D	Transferase(Phosphotransferase) domain 1	383	670	-	-
	Mepo7g02456	670	CDD	STKc_TLK	391	664	-	-
	Mepo7g02456	670	SUPERFAMILY	Protein kinase-like (PK-like)	384	666	IPR011009	-
	Mepo7g02456	670	MobiDBLite	consensus disorder prediction	35	51	-	-
	Mepo7g02456	670	PANTHER	MIXED LINEAGE PROTEIN KINASE	11	668	-	-
	Mepo7g02456	670	Coils	Coil	343	377	-	-
	Mepo7g02456	670	MobiDBLite	consensus disorder prediction	129	167	-	-
	Mepo7g02456	670	Pfam	Protein kinase domain	393	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g02456	670	MobiDBLite	consensus disorder prediction	1	177	-	-
	Mepo7g02456	670	ProSitePatterns	Protein kinases ATP-binding region signature.	398	421	IPR017441	GO:0005524
	Mepo7g02456	670	MobiDBLite	consensus disorder prediction	86	105	-	-
	Mepo7g02456	670	Coils	Coil	287	314	-	-
	Mepo7g02456	670	FunFam	Serine/threonine-protein kinase TOUSLED	383	670	-	-
	Mepo7g02456	670	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	518	530	IPR008271	GO:0004672\|GO:0006468
	Mepo7g02456	670	SMART	serkin_6	392	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo7g02456	670	ProSiteProfiles	Protein kinase domain profile.	392	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g02456	Mepo-Chr7	35707422	35716698	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g02456	375	665	MAP Kinase Kinase Kinase	AT3G13530	26.531	3.97e-27	116

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TLK	Mepo7g02456		Pkinase	5.4e-59	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g02456	K08864		-	gmx:100789927	1092.41