Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02430 ATGGATCATCAAAATCAAATGATGAACATGGAAACTAATAGGAAGTTTTTTTCATTTCCTCTGAGTAACAATTCTTCTGGTGTTCAAAATCATCATAACTACACCCAGCACCAGAACAACACCAACAACAACACTTGTAGGGATAAAATCATGGCTCATCCTCTCTTTCCTCGTCTCTTGTCTTCTTACCTCAATTGCTTGAAGGTTGGAGCACCTCCTGAAGTGGTGGCTAGCTTAGAGGAGTCATGTGCAAAATGTGAAATATTGAATGGCTCTTCAGGAAGGACAGGAAGTAGTAGTTCTTGTATAGGTGAAGATCCAGGTTTGGATCAGTTCATGGAGGCATACTGTGAGATGCTTATCAAGTATGAGCAAGAACTCACTAAACCCTTCAAAGAAGCCATGCTTTTCCTTTCAAGAATTGAGTCTCAGCTCAAGGCTGTTGCTGTCTCAACTGACTTTGGTCAAAGTGAATTTGCAGCTTCACAGAATGAGATTGATGTGCATGAAAACAACCTAGATACTACTCAAGGTGAAGATCAGGAATTAAAAGTGCAGCTCTTACGCAAGTATAGTGGCTATCTTGGAAGCCTTAAGAAAGAGTTTTTGAAGAAGAAAAAGAATGGAAAGTTACCAAAGGAAGCTCGACAGCAACTACTTGATTGGTGGAGCAGGCATTACAAATGGCCTTACCCATCGGAATCCCAAAAGCAAGCACTTGCAGAATCCACAGGCCTAGATTTGAAGCAGATCAACAATTGGTTCATTAATCAGAGAAAACGCCACTGGAAGCCTTCTGAGGATATGCAATTTGCTGTGATGGATGCCACAAATTACTACATGGAAAATGTGATGTGCAAGCCATTTCCTATGGATGCCATGCCTATGCTTCTTTAG 897 0.4103 MDHQNQMMNMETNRKFFSFPLSNNSSGVQNHHNYTQHQNNTNNNTCRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCEILNGSSGRTGSSSSCIGEDPGLDQFMEAYCEMLIKYEQELTKPFKEAMLFLSRIESQLKAVAVSTDFGQSEFAASQNEIDVHENNLDTTQGEDQELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRHWKPSEDMQFAVMDATNYYMENVMCKPFPMDAMPMLL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02430 298 ProSitePatterns 'Homeobox' domain signature. 240 263 IPR017970 GO:0000981|GO:0006355
Mepo7g02430 298 SMART ELK_2 182 203 IPR005539 GO:0003677
Mepo7g02430 298 SMART HOX_1 204 269 IPR001356 GO:0003677
Mepo7g02430 298 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 99 272 - -
Mepo7g02430 298 Pfam ELK domain 182 203 IPR005539 GO:0003677
Mepo7g02430 298 ProSiteProfiles 'Homeobox' domain profile. 202 265 IPR001356 GO:0003677
Mepo7g02430 298 ProSiteProfiles ELK domain profile. 182 202 IPR005539 GO:0003677
Mepo7g02430 298 SMART KNOX2_2 99 150 IPR005541 GO:0003677|GO:0005634
Mepo7g02430 298 Pfam Homeobox KN domain 222 261 IPR008422 GO:0003677|GO:0006355
Mepo7g02430 298 SMART KNOX1_2 44 88 IPR005540 GO:0003677|GO:0005634
Mepo7g02430 298 Pfam KNOX1 domain 47 87 IPR005540 GO:0003677|GO:0005634
Mepo7g02430 298 SUPERFAMILY Homeodomain-like 204 276 IPR009057 -
Mepo7g02430 298 CDD homeodomain 214 266 IPR001356 GO:0003677
Mepo7g02430 298 Pfam KNOX2 domain 102 147 IPR005541 GO:0003677|GO:0005634
Mepo7g02430 298 Gene3D - 200 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02430 Mepo-Chr7 35283294 35288417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02430 46 294 Homeobox Transcription Factor Family AT1G62360 65.649 6.63e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mepo7g02430 KNOX2 2.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02430 - - mtr:11431352 562.762