Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02409 ATGCAACAACACGTGGGAGCAGAAGTTCAACAACATACCCAACATAAGAAAAAGAACCAAGAAACACAGATGTGTAGGAAAATCAAACTCAGTATCTCTGATCACAACAACATCAAACAAACTACAACCGTTGATGATGTTTGTGACAATATAGACGGCGAGGATCTCTTCATTCCACCTCTCAATTTTGCTATGGTTGATAATGGCATTTTCCGTTCTGGTTTTCCTGAACCTTCCAACTTCTCTTTCCTTCAAACCCTTGGTCTTCGCTCCATCATATATTTGTGTCCTGAACCATATCCAGAAGCTAACTTGGAGTTTCTCAAGTCAAATGGGATCAAGCTTTATCACTTTGGAATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCTGAAGACACCATCCGGGAAGCACTAAAAGTTCTTCTTGATGTAAAGAACCACCCAGTTATAATTCACTGTAAGCGGGGAAAGCACCGAACAGGCTGTTTAGTCGGATGCTATAGAAAACTGCAAAAATGGTGTTTGTCATCTGTTTTTGACGAGTACCAGCGCTTTGCAGCAGCGAAAGCTCGAGTTTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCAAGCTTGAAGCATTTGCCTATACCGTTTTCATATTTGAAGAGGTAA 660 0.4061 MQQHVGAEVQQHTQHKKKNQETQMCRKIKLSISDHNNIKQTTTVDDVCDNIDGEDLFIPPLNFAMVDNGIFRSGFPEPSNFSFLQTLGLRSIIYLCPEPYPEANLEFLKSNGIKLYHFGIEGHKEPFVNIPEDTIREALKVLLDVKNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSLKHLPIPFSYLKR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02409 219 ProSitePatterns Tyrosine specific protein phosphatases active site. 152 162 IPR016130 GO:0016311|GO:0016791
Mepo7g02409 219 CDD PFA-DSP_Siw14 56 203 - -
Mepo7g02409 219 MobiDBLite consensus disorder prediction 1 22 - -
Mepo7g02409 219 Gene3D Protein tyrosine phosphatase superfamily 56 206 IPR029021 -
Mepo7g02409 219 PRINTS Plant and fungal dual specificity phosphatase signature 94 107 IPR020428 GO:0016791
Mepo7g02409 219 PRINTS Plant and fungal dual specificity phosphatase signature 130 144 IPR020428 GO:0016791
Mepo7g02409 219 PRINTS Plant and fungal dual specificity phosphatase signature 57 74 IPR020428 GO:0016791
Mepo7g02409 219 PRINTS Plant and fungal dual specificity phosphatase signature 113 127 IPR020428 GO:0016791
Mepo7g02409 219 FunFam probable tyrosine-protein phosphatase At1g05000 56 206 - -
Mepo7g02409 219 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 58 204 IPR029021 -
Mepo7g02409 219 Pfam Tyrosine phosphatase family 58 209 IPR004861 -
Mepo7g02409 219 PANTHER TYROSINE-PROTEIN PHOSPHATASE 29 208 - -
Mepo7g02409 219 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 216 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02409 Mepo-Chr7 34990354 34994341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02409 53 219 Protein tyrosine phosphatase (PTP) family AT4G03960 77.246 3.92e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02409 K18045 - gmx:100814279 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02409 7 34990354 34994341 Mepo7g02409 7 34990354 34994341 ECH