Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02313 ATGATTGATAAGGATTTTTTGTGTGCTGATGAAGCCTTGACTGTAAGTGGAAATTTCTGTGCCAAATCAGCTGCTGAAGTTGCTCATATACAACATTGGCAATCACAAACAATGATGAACAGAAAGAGGCGTCTAAATGAATCAAAGAATCCATTCAATTCTGACCCATTTGAAGCAGTTATCTTTGGCTCATGGCATCCTGTGGAGTTCATAAAAGTTAAATCAGGATCTATGAGCATACATTTCACAGATAATCACCATATGGTTATGGACAAAGGTACTTTATCAGACATTCGTATAAGGTCAAGGAAAGCTACTGTGTCAGATTGCTCCTGTTTCTTACGTCCTGGAATCGACGTATGCGTGCTATCACCTCCTCAACGAGCCGGTGATTCAGTTGGTTTAAATCTCGAGCCTGTTTGGGCTGATGCTAGAATAAGTTCTATACAGAGAAAGCCCCATGGCTCAGAGTGCTCGTGTCAGTTTTTCGTCAACTTCTATGTTGAACAAGGTTCACTTGGTTTAGAAATGAGAAGTCTTTGTAAGGATGTCAAAGTATTCGGACTCAATCAGATCTCCATCCTCCAAAAAATCGAACACAGTCCATGTGAAAATCAGCCCCATCGGTGGTCTTCATCCGAGGATTGCTCTTCATTACCACACACCAAATTGCTTTTGGGAAAGTTCTTAATCGACCTCTCATGGTTAATTGTTACATCGGTTGTGAAGAATGTTTCGTTCTGTGCAAGATCAGTAGAAAACAAGATGGTGTATCAAATTCTGGGAGGTGATAGTAGTTATAGCTCATCGTCAAACACTGAGTCTCATATTGATGTCATCGGATTCAAAACTGACGATGGCATGTTAGTACCGATTGTTTCTCAAGTTGCTATAACTAACACCAAGAGAGCTGATCATGCACGTGAATCGCGTGCAGATGAAGCGTCATCATCTTATAATGTTGACGGCTTACGACGTTCCAAACGCAGGCATGTACAGCCAGAGCGTTACGTTGGCTGTGAAGTTAAAGAGTTGGATGTTGGTACCTTTAGAAACATGCCACCTGTCAGGATAGAAACATCCAAAGCAGTAGTAGATGAAATGTCATTGCCGTTATCATTCTTGTTCCGTTTGCCGCAGAGCAGTCCGGAAAAGAGTGCCGACAAATGTCAGAAGGCCAACAAACCAAATGCTTGTCGGGAGCTTCTGGTGTACAATAGGAGGGCTAAAACCCAAGAGGTGAAGAAGACTTGTGGTGATGTTGATCAAAAGGAACATAAAAATCCACTTGCTATTATTCCTCTTCCTGATCAAGATGCTGATCCAATAGCCGTTGAGCATTGCGATCTAAATGGCAACGTTGCTAGAAGTCATGAACATCAATCACGTGACATTACTTCGCAGTATAGTCATTTGGTTAATAATCCTAAACCAAGGAAAAACATCAATTTGTTAGATGCTCCTGCAAAATCAGATGATGCTGAGAAGAACGACCATGTTTCTTCACGGTGTCAATTTTTTGGCTCTACTAAGTTACAAAGGAAGAGTACAGGTGATTTGGATGATATTGATCTTGGAAATAGATGGGAAGGGATAAAAAGAAAATCCAAGACAGGATTTCACGAGGGAAAATATCGCTCAACTCATTTAAGAAATAACGGTGAAGGAAGAAGTCACAATTATAAAGACAGAACTTTAAATGCGGCTGCATACAAGAGTTTGATCCATTCGTATTTACAGAATATTAATACAATACCGGTCACAGAAGAACCTCCTATCACTGACCAGTGGAAGAAATGTAACACAACAAACGGTGTTGGACAAAATGTGGAAACCGAGATTTCTCATGGAGAGGATGATGTAGAAAAAGCTGAAATGGATATGTTGTGGAAAGAACTTGAAGTGTCACTGGCATCGAGTTATTTTGATGACTCAGAGGTTTCAAATGCAATAGTTTTGGCCGAACCCGTGGAAAACTTAGAAGAAGTTTGTGAACATGATAATAGATTGGATGAAGAAATTGGAATATACTGCTGTAGATGTGGCTTTGTGACCACCGATATCAGAGATGTTAATCCAATTTTTGTTGAAAATTCAGTGTGGCGCCAAGAGGAGAAGCAGATTGATGGAGGAGAAGATAAAGAAGAGCCCACCAAGGATGATGAAGATGATGACTTCCATTTTTTCCCGACCGACACTTCTCGTGATGAACCGATATCGGAAGAAAACCAAAGCGTTTGGTCATTAATTCCTGAACTCAGAGAAAAATTGCATGTGCACCAAAAGAAAGCGTTTGAGTTTCTTTGGCGAAACATTGCAGGGTCTACAAATCCAGGGCTAATTGAAGCCGAATCCAAAAAAAGAGGTGGCTGTGTGATATCTCATACTCCTGGAGCCGGAAAAACTTTTCTCATCATCGCTTTTCTTGTTAGCTACTTGAAGTTGTTCCCGGGGAAGAGGCCTCTAGTTCTTGCTCCAAAAACTACGCTCTATACTTGGTATAAAGAATTTATCAAGTGGGAGATTCCTATACCGGTGTACTTGATTCATGGTCGTAGAACCTATAGGGTGTTCAAGCAGAATACAGTTGCTACTCTTCCTGGAGTTCCCAAGCCTACCGATGATGTCAAACATGTTTTGGATTGCCTTGAGAAGATCCAAAAATGGCATTCGCATCCGAGTGTTCTAATCATGGGCTACACTTCGTTTTTAACATTGATGCGAGAGGATTCAAAGTTTGCACATCGAAAGTTTATGGCTCAAGTGTTGAGGGAAAGTCCTGGACTCTTGGTACTTGATGAAGGTCACAACCCTAGAAGTACCAAATCAAGGTTACGAAAATGTTTGATGAAAGTGCAAACCGAATTGAGAATATTGCTTTCCGGTACTTTGTTTCAAAATAATTTCTGCGAATATTTCAACACTCTATGCTTGGCAAGACCGAAATTCCCTCACGAAGTGTTGAAAGCGTTAGACCCTAAATACAAGAGGAAAAAGAAAGGAGTAGATCAAAAAGGAGCAGAAAAGGCGCAATATTTGATCGAGTCACGGGCAAGAAAATTCTTCTTAGATACAATCGCTAGGAAAATTGACTCTAATGTTGGAGAGGAAAGAATTCAAGGCTTAAACATGTTGAGAAATGTGACAAATGGTTTTATCGATGTTTATGAAGCTGGAAGTTCTGATGGTTTACCAGGTTTACAAATTTATACACTGCTAATGAATACAACCGATATACAGCATGAGATTCTGCAGAAACTTCACAGCGACATGTTTAAGTGCAGTGGATACCCTCTCGAGTTAGAGCTTTTGATAACACTTGGATCAATACATCCTTGGCTGGTCAAAACCGCGGTGTGTTCTCAGAAATTTTTAACAAAGGAGCAATTGAGTGATCTTGATAAGTACAAGTTTGATTTGAAAATAGGTTCAAAAGTAAGATTTGTTTTGAGCCTTATCTATCGTGTTGTAAAGAACGAAAAGGTTCTTATCTTTTGCCACAACATTGCGCCTGTTCGCTTATTTCAAGAATATTTTGAGAAGTACTTTGGATGGCAAAAAGGCCGTGAAGTTTTAGTACTAACCGGGGAACTCGAGCTCTTTGAACGTGGGAAAATTATGGATAAATTTGAGGAGCCTGGTGGAGTATCAAAGATACTACTTGCTTCAATCACAGCTTGTGCCGAAGGAATTAGTTTGACAGCTGCGTCTCGTGTGATCATGTTGGATTCCGAGTGGAACCCTTCGAAAACGAAGCAAGCTATTGCGCGTGCGTTTCGTCCTGGTCAGCAGAAAATGGTTTATGTTTATCAGCTCTTGGTGACAGGTTCGTTGGAGGAAGATAAGTACCGAAGAACCACTTGGAAAGAGTGGGTGTCAAGCATGATTTTCAGCGAGGCGTTTGTTGAGGATCCTTCTCGTTGGCAAGCTGAGAAGATTGAAGATGATATTCTAAGGGAAATGGTCGAGGAGGATAAGTCAAAATCATTCCATATGATCATGAAGAATGAAAAGGCTTCAACAAAAACATAA 4032 0.405 MIDKDFLCADEALTVSGNFCAKSAAEVAHIQHWQSQTMMNRKRRLNESKNPFNSDPFEAVIFGSWHPVEFIKVKSGSMSIHFTDNHHMVMDKGTLSDIRIRSRKATVSDCSCFLRPGIDVCVLSPPQRAGDSVGLNLEPVWADARISSIQRKPHGSECSCQFFVNFYVEQGSLGLEMRSLCKDVKVFGLNQISILQKIEHSPCENQPHRWSSSEDCSSLPHTKLLLGKFLIDLSWLIVTSVVKNVSFCARSVENKMVYQILGGDSSYSSSSNTESHIDVIGFKTDDGMLVPIVSQVAITNTKRADHARESRADEASSSYNVDGLRRSKRRHVQPERYVGCEVKELDVGTFRNMPPVRIETSKAVVDEMSLPLSFLFRLPQSSPEKSADKCQKANKPNACRELLVYNRRAKTQEVKKTCGDVDQKEHKNPLAIIPLPDQDADPIAVEHCDLNGNVARSHEHQSRDITSQYSHLVNNPKPRKNINLLDAPAKSDDAEKNDHVSSRCQFFGSTKLQRKSTGDLDDIDLGNRWEGIKRKSKTGFHEGKYRSTHLRNNGEGRSHNYKDRTLNAAAYKSLIHSYLQNINTIPVTEEPPITDQWKKCNTTNGVGQNVETEISHGEDDVEKAEMDMLWKELEVSLASSYFDDSEVSNAIVLAEPVENLEEVCEHDNRLDEEIGIYCCRCGFVTTDIRDVNPIFVENSVWRQEEKQIDGGEDKEEPTKDDEDDDFHFFPTDTSRDEPISEENQSVWSLIPELREKLHVHQKKAFEFLWRNIAGSTNPGLIEAESKKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLIHGRRTYRVFKQNTVATLPGVPKPTDDVKHVLDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKFAHRKFMAQVLRESPGLLVLDEGHNPRSTKSRLRKCLMKVQTELRILLSGTLFQNNFCEYFNTLCLARPKFPHEVLKALDPKYKRKKKGVDQKGAEKAQYLIESRARKFFLDTIARKIDSNVGEERIQGLNMLRNVTNGFIDVYEAGSSDGLPGLQIYTLLMNTTDIQHEILQKLHSDMFKCSGYPLELELLITLGSIHPWLVKTAVCSQKFLTKEQLSDLDKYKFDLKIGSKVRFVLSLIYRVVKNEKVLIFCHNIAPVRLFQEYFEKYFGWQKGREVLVLTGELELFERGKIMDKFEEPGGVSKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFSEAFVEDPSRWQAEKIEDDILREMVEEDKSKSFHMIMKNEKASTKT 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02313 1343 Pfam SNF2-related domain 756 1000 IPR000330 GO:0005524|GO:0140658
Mepo7g02313 1343 SMART ultradead3 753 1005 IPR014001 -
Mepo7g02313 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1062 1325 IPR027417 -
Mepo7g02313 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 745 993 IPR027417 -
Mepo7g02313 1343 CDD SF2_C_SNF 1137 1273 - -
Mepo7g02313 1343 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1148 1309 IPR001650 -
Mepo7g02313 1343 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 782 982 IPR014001 -
Mepo7g02313 1343 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 89 1341 IPR044567 GO:0080188
Mepo7g02313 1343 MobiDBLite consensus disorder prediction 721 739 - -
Mepo7g02313 1343 Pfam Helicase conserved C-terminal domain 1145 1261 IPR001650 -
Mepo7g02313 1343 MobiDBLite consensus disorder prediction 702 740 - -
Mepo7g02313 1343 Gene3D - 1068 1343 IPR027417 -
Mepo7g02313 1343 Gene3D - 730 1024 IPR038718 -
Mepo7g02313 1343 CDD DEXHc_ATRX-like 757 983 - -
Mepo7g02313 1343 SMART helicmild6 1173 1262 IPR001650 -
Mepo7g02313 1343 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02313 Mepo-Chr7 34009012 34015413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02313 1141 1280 RAD5 or RAD16-like Gene Family AT5G43530 32.867 2.41e-11 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mepo7g02313 SNF2_N 1.1e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02313 K10875 - gmx:100811703 1828.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02313 7 34009012 34015413 Mepo7g02313 7 34009012 34015413 ECH
Mepo3g05580 3 69843378 69847974 Mepo7g02313 7 34009012 34015413 PCT