Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02310 ATGGGTGGAAATTCACCATGTGCTTCATGCAAGCTTCTGAGACGAAGATGCACAAAAGATTGCACCTTTGCTCCTTATTTCCCTTCTCATGAACCCCAAAAATTTGCCATAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGTTGCAGGAGCTCCCAGTTCACCAAAGAGCAGATGCAGTGAACAGTTTAGTCTATGAAGCAAATGCAAGAGTGAGGGATCCAGTTTATGGCTGTGTTGGAGCAATATCTTACTTGCAAAATCAAGTTTCTGAGCTTCAAATGCAACTTGCAGTTGCTCAAGCAGAGATACTATGCATCCAGATGCAAAATGAGCAAGTGATTCCAACACCACAAATCAACCAAGATCAGAAATCTTCTTACTATATCCAAGATGAACTCACTCAGTACCTTAATTATGGTTCTTCTTCTAGTAATAATGTAATTCATGATTCTCTTAAGAGAGAGAATAATATGTATGGACATGATATGGTTTCTTGA 507 0.3886 MGGNSPCASCKLLRRRCTKDCTFAPYFPSHEPQKFAIVHKVFGASNVSKMLQELPVHQRADAVNSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQNEQVIPTPQINQDQKSSYYIQDELTQYLNYGSSSSNNVIHDSLKRENNMYGHDMVS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02310 168 Coils Coil 85 105 - -
Mepo7g02310 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Mepo7g02310 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 135 - -
Mepo7g02310 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02310 Mepo-Chr7 33964855 33965728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02310 3 128 AS2 family AT2G30130 81.538 1.22e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo7g02310 LOB 1.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02310 - - lang:109360574 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05572 3 69712466 69713406 Mepo7g02310 7 33964855 33965728 ECH
Mepo7g02310 7 33964855 33965728 Mepo7g02310 7 33964855 33965728 ECH
Mepo3g05572 3 69712466 69713406 Mepo7g02310 7 33964855 33965728 PCT