Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02290 ATGTCAAACCCTAACATCAAAACATTCGACTGGACCTTCAACCCCGAACCCAAAGACGAACCACTCCAAGTCAAAGGCCACAAATTCCTCTTCTTCATTGCCATCTTCACCATCATCATCCTCTTCACAGCACTCTTCCTTTGCGCCCGCTGGCTCTTCCAAACCCACCACACTCCCCACGCGCCATCTCACACGTCCACATTCTCCTCTCAATCCGAAGGACTCGACACCGACGCCATCAAGAAGCTGCCAATCATACTACACCAATCCAATACTTCAAACCATGCATTGGAGGAAACGGAATGTTGCATTTGTTTAAGCACTTTTAGAGATGGTGAGAAGGTGAAAGTGTTACCGGGTTGTGATCATTATTTTCATTGTGAATGTGTTGATGCATGGCTTGTGAACCATTCTAGTTGTCCACTGTGTAGAGCTTCTCTTAAGATTGATTTAGAGTTTCCTAAGATTTTGATTCAAGAACCACCTATTAGATATAATCTTCCTCTTTAA 510 0.4392 MSNPNIKTFDWTFNPEPKDEPLQVKGHKFLFFIAIFTIIILFTALFLCARWLFQTHHTPHAPSHTSTFSSQSEGLDTDAIKKLPIILHQSNTSNHALEETECCICLSTFRDGEKVKVLPGCDHYFHCECVDAWLVNHSSCPLCRASLKIDLEFPKILIQEPPIRYNLPL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02290 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 150 IPR013083 -
Mepo7g02290 169 Pfam Ring finger domain 101 144 IPR001841 -
Mepo7g02290 169 SMART ring_2 102 143 IPR001841 -
Mepo7g02290 169 SUPERFAMILY RING/U-box 91 152 - -
Mepo7g02290 169 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Mepo7g02290 169 FunFam RING-H2 finger protein ATL66 67 149 - -
Mepo7g02290 169 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 21 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02290 Mepo-Chr7 33784979 33785527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02290 19 150 C3H Transcription Factor Family AT3G11110 38.806 8.79e-26 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05546 3 69524357 69525232 Mepo7g02290 7 33784979 33785527 PCT