Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02288 ATGATCAGTGCAAATTCCAATTCGAATTCAAACTCAAACGGTGGTGGTGATGAAAACGGTGATAAAGTGAAGGGTTCATGGAGTAAAACTGAAGATGAAACATTGGTGAAACTGGTAAAAGAAAACGGTGCAAGAAACTGGTCGGTGATAAGCAACGGAATCCCCGGTCGTTCTGGAAAATCATGCCGTCTACGGTGGTGTAATCAGCTGAGTCCAACCGTTCAACACCTTCCTTTTACACCGGCAGAGGATAGCATCATCATTCAAGCACATGCACTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCAGGGAGAACAGATAACGCCATAAAAAATCATTGGAATTCAACTCTCCGCCGTTGTCGCACGGCGGCTCCTGCAGCGGTTCTACCGGTTACAACGGTTGTTCAAAGGGTTCCAACGGCGGTGCCGGTGATTCCCACCGGTGTGATAACTGGAAAACGTGTGAATGAAAGTTACGACGGTGATTATTATAAGGATTTGTTGAGTCTCGGTACCCGTTATAAACGTCCTTGTGTTGTGGTTGAGAATAATAGCGGGTCACGTGGGTCACGTGAGGGTGAAGAAACGGTAACGGAAGATGATGACGCAGGGAATAAGGGTGTTAACGTGGTTAAGACGTCGTTAAGTTTGTTTCCACCTGGTTTTCTGAAAGAAGAAGAAGAGAGAAAAGAAAAAGAAAAAGAAAAAGAAATTGAAGATTTTGAAGATAGTAATGATGATTTGAAGTTACTGAAAAATGAGAAATTGAGGTCGATGCTTCAGCGCATGATAGCAGAGGAAGTTAGGAGTTATGTTGATAACATGCGCCTTGGTGGTGGGTTAGCTCCTGATTCAACACTTCGAAAGTGA 882 0.4399 MISANSNSNSNSNGGGDENGDKVKGSWSKTEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPTVQHLPFTPAEDSIIIQAHALHGNKWATISRLLPGRTDNAIKNHWNSTLRRCRTAAPAAVLPVTTVVQRVPTAVPVIPTGVITGKRVNESYDGDYYKDLLSLGTRYKRPCVVVENNSGSRGSREGEETVTEDDDAGNKGVNVVKTSLSLFPPGFLKEEEERKEKEKEKEIEDFEDSNDDLKLLKNEKLRSMLQRMIAEEVRSYVDNMRLGGGLAPDSTLRK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02288 293 SMART sant 23 72 IPR001005 -
Mepo7g02288 293 SMART sant 75 123 IPR001005 -
Mepo7g02288 293 MobiDBLite consensus disorder prediction 187 209 - -
Mepo7g02288 293 MobiDBLite consensus disorder prediction 1 17 - -
Mepo7g02288 293 MobiDBLite consensus disorder prediction 1 29 - -
Mepo7g02288 293 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Mepo7g02288 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 125 IPR017930 -
Mepo7g02288 293 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Mepo7g02288 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Mepo7g02288 293 ProSiteProfiles Myb-like domain profile. 19 70 IPR001005 -
Mepo7g02288 293 CDD SANT 26 68 IPR001005 -
Mepo7g02288 293 Coils Coil 228 258 - -
Mepo7g02288 293 Gene3D - 78 124 - -
Mepo7g02288 293 MobiDBLite consensus disorder prediction 192 209 - -
Mepo7g02288 293 FunFam MYB transcription factor 24 75 - -
Mepo7g02288 293 CDD SANT 78 121 IPR001005 -
Mepo7g02288 293 Gene3D - 23 75 - -
Mepo7g02288 293 Pfam Myb-like DNA-binding domain 78 120 IPR001005 -
Mepo7g02288 293 Pfam Myb-like DNA-binding domain 24 70 IPR001005 -
Mepo7g02288 293 PANTHER MYB PROTEIN-RELATED 24 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02288 Mepo-Chr7 33766234 33767355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02288 20 136 MYB Transcription Factor Family AT3G50060 64.957 2.42e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g02288 Myb_DNA-binding 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02288 - - mtr:11423998 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02288 7 33766234 33767355 Mepo7g02288 7 33766234 33767355 ECH