Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02282 ATGTGCAGTGGTTCAAAAAGTAAACTTTCTTCAGCAGACTGTGCCATGGAGGATAAGCTTCAAAAGGGTATCCACAACTCCTCAATCTTGCTTGAATTGTCTGCATCTGATGATTTTGATGCTTTCAAGAGAGAAGTAGATGAGAAGGGTTTGGATGTGAACGAGGAAGGCTTTTGGTATGGTAGAAGAATTGGATCGAAGAAGATGGAATCCGAAAAGAGGACTCCTCTCATGATTGCTTCCTTGTTTGGAAGCACTAGAGTGGTTGAGTATATTGTTTTGACAGGGAAGGTTGATGTCAACGGAGTTTGTGGTTCGGATATGGCCACTGCTCTTCATTGCGCTGTTGCTGGTGGTTCTGAGTTTTCGCTTGAGGTTGTCAAGCTCTTGCTTGATGCTGGAGCAGATGCTGATTGTCTTGATGCAAGTGGAAACAAACCGGTTGATCTGATTGCACCGGCCTTTAATTCGTCGTCCAAATCGCGTAGGAAGGTCTTGGAGATGTTTTTGAGAGGTGAGGTAAGTGCTGAACTCATCCAAGGGGAAATGGATGCTCCTTTCTCGTTGAAAAAAGAAGGTGGTGATAAGAAAGAGTTTCCTATTGATATATCGTTGCCGGACATAAACAATGGTGTATATGGATCAGATGAGTTTAGGATGTACAGTTTCAAGGTGAAGCCATGCTCGAGGGCTTACTCTCACGATTGGACCGAGTGTCCCTTCGTTCATCCAGGTGAGAATGCAAGGAGGAGAGACCCAAGGAAATACCCTTACAGCTGTGTTCCCTGCCCAGAGTTTCGCAAAGGGTCTTGCCAGAAAGGGGATTCTTGCGAGTATGCACATGGTGTTTTCGAGTCATGGCTACATCCCGCACAATACCGAACAAGGCTTTGCAAGGACGAGACTGGCTGCAATAGAAAAGTCTGCTTCTTTGCTCACAGACCCGAAGAGCTGCGCCCTGTGTATGCTTCCACTGGGTCAGCTATGCCTTCACCAAAGTCCTATTCAGCTAGTGGAATCGACATGACATCGATGAGTCCGTTGTCTCTTAGCTCCTCATCTCTGCCTATGTCAACTGTTTCAACACCACCCATGTCTCCCTTGGCAGGTTCATCATCTCCCAAGAGTGGAAACATGTGGCAGAACAAATTAAACCTCACTCCACCATCGTTGCAGCTCCCAGGTAGCCGGTTGAAGAGTGCTTTGAGTGCAAGGGATCTCGATCTTGAGATGGAACTGCTTGGTCTGGATAGTCCTCGTCGTCAACAGCAGCAGCAGCAACAACAGCAATTGATTGAAGAGATTGCCAGAATCTCTTCCCCATCTTTCAGGAACAGCGAATTCAACAGGATTGCTGATTTGAATCCTACTAACCTTGATGACCTATTAGCATCAGCTGATCCTAACTTACTATCTCAACTACATGGACTTTCCATGCAACCTTCAACACCCACACAGCAAATGCATTCTCCAAGTGCAATGCAGATGCGCCAAAACATGAACATGGGCCAAAACATGAACCACCTTCGTGCAAGTTATCCATCAAACAACATGCCTTCCTCTCCAGTGAGGAAGCCCTCACCATATGGATTTGATTCATCGGCCGCCGTAGCAGCTGCCGTGATGAATTCCAGGTCTGCTGCCTTTGCAAAGCAGCGCAGCCAAAGTTTCATTGACCGTGGCGCTGCAACTCACCATCTTGGACTTTCTCCGCCTTCCAACCCTTCCTGCAGGGTGTCGTCCGGCCTTTCAGATTGGGGTTCCCCCACTGGGAAACTTGATTGGGGTGTAAACGGTGACGAGCTGAACAAGCTGAGGAAATCTGCTTCTTTTGGTTTCAGAAATAATGGACCAGCAGCACCAACTGCATCCCAACATGCTGAACCTGATGTTTCATGGGTTAATTCATTGGTTAAGGATGTTCCATCTGAGAATTCAGGCATATATGGTGCCGAGAATATGCGGCAGCTGCAGCAATATGATCTGAGTCGAGACGTGCTTCCACCATGGGTGGAGCAGATGTACAAAGAGCAGGAGCAGATGGTAGCATGA 2052 0.4737 MCSGSKSKLSSADCAMEDKLQKGIHNSSILLELSASDDFDAFKREVDEKGLDVNEEGFWYGRRIGSKKMESEKRTPLMIASLFGSTRVVEYIVLTGKVDVNGVCGSDMATALHCAVAGGSEFSLEVVKLLLDAGADADCLDASGNKPVDLIAPAFNSSSKSRRKVLEMFLRGEVSAELIQGEMDAPFSLKKEGGDKKEFPIDISLPDINNGVYGSDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCNRKVCFFAHRPEELRPVYASTGSAMPSPKSYSASGIDMTSMSPLSLSSSSLPMSTVSTPPMSPLAGSSSPKSGNMWQNKLNLTPPSLQLPGSRLKSALSARDLDLEMELLGLDSPRRQQQQQQQQQLIEEIARISSPSFRNSEFNRIADLNPTNLDDLLASADPNLLSQLHGLSMQPSTPTQQMHSPSAMQMRQNMNMGQNMNHLRASYPSNNMPSSPVRKPSPYGFDSSAAVAAAVMNSRSAAFAKQRSQSFIDRGAATHHLGLSPPSNPSCRVSSGLSDWGSPTGKLDWGVNGDELNKLRKSASFGFRNNGPAAPTASQHAEPDVSWVNSLVKDVPSENSGIYGAENMRQLQQYDLSRDVLPPWVEQMYKEQEQMVA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02282 683 ProSiteProfiles Zinc finger C3H1-type profile. 257 284 IPR000571 GO:0046872
Mepo7g02282 683 MobiDBLite consensus disorder prediction 346 379 - -
Mepo7g02282 683 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 262 282 IPR000571 GO:0046872
Mepo7g02282 683 Gene3D - 258 320 - -
Mepo7g02282 683 Pfam Ankyrin repeats (3 copies) 70 138 IPR002110 GO:0005515
Mepo7g02282 683 MobiDBLite consensus disorder prediction 507 523 - -
Mepo7g02282 683 ProSiteProfiles Ankyrin repeat region circular profile. 107 141 - -
Mepo7g02282 683 ProSiteProfiles Ankyrin repeat profile. 107 142 IPR002110 GO:0005515
Mepo7g02282 683 SMART ANK_2a 72 102 IPR002110 GO:0005515
Mepo7g02282 683 SMART ANK_2a 107 139 IPR002110 GO:0005515
Mepo7g02282 683 SMART c3hfinal6 292 315 IPR000571 GO:0046872
Mepo7g02282 683 SMART c3hfinal6 257 283 IPR000571 GO:0046872
Mepo7g02282 683 SUPERFAMILY Ankyrin repeat 25 159 IPR036770 -
Mepo7g02282 683 Gene3D - 24 173 IPR036770 -
Mepo7g02282 683 FunFam Zinc finger CCCH domain-containing protein 66 215 283 - -
Mepo7g02282 683 MobiDBLite consensus disorder prediction 507 527 - -
Mepo7g02282 683 PANTHER UNKEMPT FAMILY MEMBER 32 641 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02282 Mepo-Chr7 33654912 33658137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02282 25 678 C2H2 Transcription Factor Family AT5G12850 40.193 1.54e-142 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo7g02282 Ank_2 7.4e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02282 - - gmx:100783376 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02282 7 33654912 33658137 Mepo7g02282 7 33654912 33658137 ECH