Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02250 ATGGATCCTCAAGAACCCACCTGTGTTGATCGAAAAATCTGGCAGTGCTTGGCCGGACCCTCGGTCAAAATTCCGAAACTAAATTCTCAAGTTTTTTACTTTCCACCAGGTCACTTAGAACATGCATGCCCTTCCCCTAACACTGAAACACTCTCCCTTATCAATGGTTACCGTCCCATCATTCCCTGCCTCGTCTCCCACGTTGATCTCTTAGCTGATCGTCAAACCGATGAAGTCTTTGTAAAACTGATCCTAACTCCCATCACCAATGACAGTGTTCACGAACCTCAGGAGCCTGAGGTTTGTGAAAACGAACATGGTGGTGATGGGCTTGTTTTCTCTGGCAAGACTCTCACCCAGTCTGATGCTAATAACGGCGGTGCATTCTCCGTACCTTCTGAATGCGCGAAATTGATATTCCCGCCACTTGACCTACAATCCCAAATGCCGTCTCAGGTACTTGCGGTCAAGGACATCCACAATTTTGTTTGGAACTTTCGCCACACCTACCGTGGGTCTCCCAAGCGACACCTAATCACCACTAACTGGAGTAAGTTCGTTGACACAAAGAAAATTATTGGCGGCGATTCCCTCGTTTTAATGAAAAATTCTGAAGATAAGATCTTCATCGGAATCCGCAGGCACAAGTTTAGTGCTGCTGCTAAGATAACGGAAAAATCCGTTATGGAGGCAGCAGAATTGGCGGATAAGAACATGACTTTTGAAGTTATTTATTATCCGACGGCTAGTCATTGGTGTAATTTTGTGGTGGATGCTGAAGTTGTAAAGAAAGCAATGCAGATTAATTGGGTTTCTGGAATGAGAGTTAAACTTTGTTTGAAGACTGATGAATCTTCAAAGAGAAGCTCAATTTTTCAAGGGACCGTATCTGCTCTATCTGATCCTTCTCATCATCCATGGCGCATGCTTCAGGTTAACTGGGATGAATCTGAAGTCTCTCAGAATTCAAGTCAAACAAGTCCTTGGCAAATTGAACTTATTTCCCACACTCCAACACTGCCTCTAAAGTTTCCCCCACAAAAAAAGCTTAGAATTGCTCAGGGCTCTGCCTTATCAACTAGCATAGAGAGACCCTCCATTCCAGAGATAGACTTCAATTTCTTAAACCCATCGTCGTTGAATTATGATGCTTTTCTTGATAGCATGCAGGGAACCATGCCTAATCTTTTTTCTGCCTCAACTTCTTCGACCTCTTTGAATGATAATGTCAATGGTTTTGTTGAAGGTACCCACAACCTCAACACCAAAAAAGTTAATCCTCGTTCTATTAAGCTATTTGGTAAGACCATAGAGGTTGTTGAAAAGGATTTGCACGAGTCTGGTATCAATGGAGAGGATGGTTCCGGATAA 1371 0.4325 MDPQEPTCVDRKIWQCLAGPSVKIPKLNSQVFYFPPGHLEHACPSPNTETLSLINGYRPIIPCLVSHVDLLADRQTDEVFVKLILTPITNDSVHEPQEPEVCENEHGGDGLVFSGKTLTQSDANNGGAFSVPSECAKLIFPPLDLQSQMPSQVLAVKDIHNFVWNFRHTYRGSPKRHLITTNWSKFVDTKKIIGGDSLVLMKNSEDKIFIGIRRHKFSAAAKITEKSVMEAAELADKNMTFEVIYYPTASHWCNFVVDAEVVKKAMQINWVSGMRVKLCLKTDESSKRSSIFQGTVSALSDPSHHPWRMLQVNWDESEVSQNSSQTSPWQIELISHTPTLPLKFPPQKKLRIAQGSALSTSIERPSIPEIDFNFLNPSSLNYDAFLDSMQGTMPNLFSASTSSTSLNDNVNGFVEGTHNLNTKKVNPRSIKLFGKTIEVVEKDLHESGINGEDGSG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02250 456 Gene3D - 113 216 IPR015300 -
Mepo7g02250 456 Pfam Auxin response factor 231 310 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo7g02250 456 CDD B3_DNA 116 214 IPR003340 GO:0003677
Mepo7g02250 456 SMART B3_2 113 216 IPR003340 GO:0003677
Mepo7g02250 456 Pfam B3 DNA binding domain 116 215 IPR003340 GO:0003677
Mepo7g02250 456 Gene3D - 270 338 - -
Mepo7g02250 456 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 396 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo7g02250 456 SUPERFAMILY DNA-binding pseudobarrel domain 111 214 IPR015300 -
Mepo7g02250 456 ProSiteProfiles B3 DNA-binding domain profile. 114 216 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02250 Mepo-Chr7 33220731 33223392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02250 9 455 B3 DNA Binding Superfamily AT1G77850 36.182 3.00e-97 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo7g02250 B3 7.7e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02250 - - mtr:11409684 833.943