Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02236 ATGGATTTGGAAACCCTTTATTCTCCTTATTTTATGTTGGATACAAATTGGCTTGTTGAGGAGAGTTACCAAACAGAATGGAGTAGAGAAGATAACAAGAAATTTGAAAGTGCTCTTGCTATATATGATAAGGATACACCAGATAGATGGCTTAAGGTTGCTGAGATGATTCCTGGTAAGACTGTTTTTGATGTGATTAAGCAGTATAGGGAATTGGTAGAAGATGTGAGTGAAATTGAAGCTGGAAATGTTCCAATTCCTGGTTATCTTGCTTCTTCTTTCACCTTTGAAGTTGTTGAAAAACAAAACTATGATGGAAACAGAAGAAGGCATGTCACTGTTAGAGGTTCTGATCATGAGAGGAAGAAAGGTGTTCCTTGGACCGAAGAGGAACATAGACGTTTTCTGATGGGACTTCTAAAGTATGGCAAAGGCGACTGGAGAAACATCTCGCGCAATTTCGTTGTGACAAAGACTCCAACACAAGTAGCAAGTCATGCACAAAAGTACTACATAAGGCAAAAGGTTTCTTCTGGAGGCAAAGATAAAAGAAGACCAAGCATTCATGATATCACAACTGTTACTCTCACAGAAACTTCTTCTCCATTAGATAACAAGTCCTTGGTAGTCAATGTGTCTCCTATGCAGCAGAAAATGGGTTGGAGTAATAGCCACTACAATGATGGATCACCACAAGGGCAGGATCTCTATGACTGCTCTTTCCATGAGGCTTATGCTAAGCTGAAAGTTTCCGGTTTCGCGACAGCTTCTAGAGACTTCAACAAAGGAGCTGTTTTTGGTATTCATGCACTATAA 816 0.3971 MDLETLYSPYFMLDTNWLVEESYQTEWSREDNKKFESALAIYDKDTPDRWLKVAEMIPGKTVFDVIKQYRELVEDVSEIEAGNVPIPGYLASSFTFEVVEKQNYDGNRRRHVTVRGSDHERKKGVPWTEEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSSGGKDKRRPSIHDITTVTLTETSSPLDNKSLVVNVSPMQQKMGWSNSHYNDGSPQGQDLYDCSFHEAYAKLKVSGFATASRDFNKGAVFGIHAL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02236 271 FunFam transcription factor MYB1R1 125 176 - -
Mepo7g02236 271 FunFam Transcription factor SRM1 19 86 - -
Mepo7g02236 271 NCBIfam myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Mepo7g02236 271 Gene3D - 20 86 - -
Mepo7g02236 271 Pfam Myb-like DNA-binding domain 126 170 IPR001005 -
Mepo7g02236 271 SUPERFAMILY Homeodomain-like 25 79 IPR009057 -
Mepo7g02236 271 ProSiteProfiles SANT domain profile. 127 175 IPR017884 -
Mepo7g02236 271 CDD SANT 26 73 IPR001005 -
Mepo7g02236 271 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Mepo7g02236 271 Gene3D - 125 176 - -
Mepo7g02236 271 SMART sant 123 173 IPR001005 -
Mepo7g02236 271 SMART sant 23 75 IPR001005 -
Mepo7g02236 271 CDD SANT 126 170 IPR001005 -
Mepo7g02236 271 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 21 233 IPR043363 -
Mepo7g02236 271 SUPERFAMILY Homeodomain-like 121 175 IPR009057 -
Mepo7g02236 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 175 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02236 Mepo-Chr7 33037085 33039482 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo7g02236 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02236 - - cam:101492144 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01768 3 26037011 26039836 Mepo7g02236 7 33037085 33039482 ECH
Mepo7g02236 7 33037085 33039482 Mepo7g02236 7 33037085 33039482 ECH