Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02218 ATGCAGGTAAATGAGGACAAGTTTCATGTTGTTGTGGACATAGACAACAATGTATGTCACCGGAGTAATGAACGATGTTCTAACTCCGGTGACCGGTTAAATGAGGAGGATCAAAGGTGTGAGATTGTAGGAGTGTCTGAAAAACAAAGAGGATCTTGTGATTCAGATGATAATTCATCTGAATCAGAATGTTCTGTGGAGTTGGATCTGGATGGTGGTGGTTTAGTTTCTGATGTTAAGGTGCATTTGGATAAGGTGGAGAGGGATTGTAGGATTTGTCATCTTAGTATGGATATGACAAATCATGAATCTGGAATTCCTATGGAGCTTGGATGTTTTTGTAAAAATGATTTGGCTGCTGCTCATAAGCATTGTGCTGAGGCTTGGTTCAAGATTAAAGGCAACAAAACTTGTGAAATCTGTGGATCAATTGCACACAATGTAGCCGGTGCTATCGAAGTTCAAATGACAGAACAGTTTAATGAATCAAGTGATCCCTCCATTGTACCACCAGTTGGACCTTCACCGCCATCAGAAACTCGAAATTTTTGGCAGGGACATCGGTTTTTGAATTTCCTTCTAGCATGTATGGTTTTCGCCTTTGTCATATCATGGCTTTTTCACTTTAATGTTCCCTCTTGA 642 0.4019 MQVNEDKFHVVVDIDNNVCHRSNERCSNSGDRLNEEDQRCEIVGVSEKQRGSCDSDDNSSESECSVELDLDGGGLVSDVKVHLDKVERDCRICHLSMDMTNHESGIPMELGCFCKNDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVAGAIEVQMTEQFNESSDPSIVPPVGPSPPSETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02218 213 ProSiteProfiles Zinc finger RING-CH-type profile. 82 148 IPR011016 GO:0008270
Mepo7g02218 213 PANTHER ZINC FINGER, RING-CH-TYPE 23 212 - -
Mepo7g02218 213 Pfam RING-variant domain 90 141 IPR011016 GO:0008270
Mepo7g02218 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 150 IPR013083 -
Mepo7g02218 213 SMART ringv_2 89 142 IPR011016 GO:0008270
Mepo7g02218 213 SUPERFAMILY RING/U-box 87 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02218 Mepo-Chr7 32904584 32907719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02218 54 213 C3H Transcription Factor Family AT5G05830 63.354 1.62e-68 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02218 - - mtr:11413730 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01696 3 25250623 25253775 Mepo7g02218 7 32904584 32907719 ECH
Mepo7g02218 7 32904584 32907719 Mepo7g02218 7 32904584 32907719 ECH