Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo7g02218 | ATGCAGGTAAATGAGGACAAGTTTCATGTTGTTGTGGACATAGACAACAATGTATGTCACCGGAGTAATGAACGATGTTCTAACTCCGGTGACCGGTTAAATGAGGAGGATCAAAGGTGTGAGATTGTAGGAGTGTCTGAAAAACAAAGAGGATCTTGTGATTCAGATGATAATTCATCTGAATCAGAATGTTCTGTGGAGTTGGATCTGGATGGTGGTGGTTTAGTTTCTGATGTTAAGGTGCATTTGGATAAGGTGGAGAGGGATTGTAGGATTTGTCATCTTAGTATGGATATGACAAATCATGAATCTGGAATTCCTATGGAGCTTGGATGTTTTTGTAAAAATGATTTGGCTGCTGCTCATAAGCATTGTGCTGAGGCTTGGTTCAAGATTAAAGGCAACAAAACTTGTGAAATCTGTGGATCAATTGCACACAATGTAGCCGGTGCTATCGAAGTTCAAATGACAGAACAGTTTAATGAATCAAGTGATCCCTCCATTGTACCACCAGTTGGACCTTCACCGCCATCAGAAACTCGAAATTTTTGGCAGGGACATCGGTTTTTGAATTTCCTTCTAGCATGTATGGTTTTCGCCTTTGTCATATCATGGCTTTTTCACTTTAATGTTCCCTCTTGA | 642 | 0.4019 | MQVNEDKFHVVVDIDNNVCHRSNERCSNSGDRLNEEDQRCEIVGVSEKQRGSCDSDDNSSESECSVELDLDGGGLVSDVKVHLDKVERDCRICHLSMDMTNHESGIPMELGCFCKNDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVAGAIEVQMTEQFNESSDPSIVPPVGPSPPSETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo7g02218 | 213 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 82 | 148 | IPR011016 | GO:0008270 | |
Mepo7g02218 | 213 | PANTHER | ZINC FINGER, RING-CH-TYPE | 23 | 212 | - | - | |
Mepo7g02218 | 213 | Pfam | RING-variant domain | 90 | 141 | IPR011016 | GO:0008270 | |
Mepo7g02218 | 213 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 150 | IPR013083 | - | |
Mepo7g02218 | 213 | SMART | ringv_2 | 89 | 142 | IPR011016 | GO:0008270 | |
Mepo7g02218 | 213 | SUPERFAMILY | RING/U-box | 87 | 144 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo7g02218 | Mepo-Chr7 | 32904584 | 32907719 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo7g02218 | 54 | 213 | C3H Transcription Factor Family | AT5G05830 | 63.354 | 1.62e-68 | 207 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo7g02218 | - | - | mtr:11413730 | 413.69 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo3g01696 | 3 | 25250623 | 25253775 | Mepo7g02218 | 7 | 32904584 | 32907719 | ECH | |
Mepo7g02218 | 7 | 32904584 | 32907719 | Mepo7g02218 | 7 | 32904584 | 32907719 | ECH |