Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02200 ATGGCTCCTTCTTCTGATCATATCAATCACCTTTCTCATCCATGTATATATGGGGATTATGTCTCTTCACACCCAGAGAGAAAGTCTGGTTTCATGAAATGGCTTAGTAAGCTTTTCAAAGGTGGGTCCAATAGAGGAAGGAGTGGTCGTCATCATTATGATCCTGCAGAGGAAGGCATGTCTTGGCGTGCTCCATCTAGAGCTTTGGATGACCGTGCTAGAGCTCAGAAGGAGAAAGAGGATTTGGGCCATGCAATGTCACTTTCTTCAGCTGAAGATATGAAGAGACCAAATGCCCATCAAGGATATAGGTGGGGGGAAGAAAATGATGAAGATTATGGAAAGGCACTTCATGATAACTTTAACTCATCTGCACACCCTCCTTATGCTCCTGCACCATTTTATCCCAATGAATATAGAAGACTATGTGGTGGCTGCAATCAGGAGATAATCTATGGAAATTGTTTAGGCTGCATGGATACTTATTTTCATCCTGACTGCTTTCGATGCCACTCTTGTCGTTCTCCCATTACAGAGCGCGAGTTTTCTTTGTCAGGGAAGCATCCATATCACAAATCTTGTTTTAAAGAGTTGACTCACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGCTGCTGGTTTGATTGAGTATAGATGCCACCCCTTTTGGTCCCAAAAGTATTGTCCATCTCATGAATATGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTAGAGCCTCGGAATACGAAATACTATAGACTTGAGGACGGGCGAAGCCTGTGCTTAGAGTGCATGGAATCTGCTATAATGGATACTGGTGACTGTCAGCCTCTATACCATTCAATCAGAGATTATTATGAAGGAATGCATATGAGAATTGATCAGCAAGTTCCTATGCTTCTTGTTGAAAGAGAAGCACTTAATGATGCTATTGTTGGAGAGAAGACTGGATTTCACCATTTGCCAGAAACAAGAGGTTTATGCCTTTCAGAAGAGCAGACTGTAACCAGTATACATAGAAGGCCAAGAATTGGAGGCCATAGACTTATTGGGATGAGAACTCAACCTCAAAAGCTGATAAGAAAATGTGAAGTTACAGCAATTCTTGTTCTATATGGTCTACCAAGGTTACTAACAGGTGCTATACTTGCCCATGAGTTGATGCATGCATGGTTACGCCTTAAAGGTTATCGCAATCTCAGTCCTGAAGTAGAGGAAGGTATATGCCAGGTTCTGTCATATATGTGGCTTGAGTCAGAAGTTATGCCAACAACAAACTCTCATTGCATGGCATCAACATCCACAGCTGCTGCTTCTTCCTCAAAGAAAGGTGCAAAGTCTCATGTTGAAAACAAATTGGGTGAATTCTTCAAGAATCAAATTGTCAATGATTCTTCTCCAGCTTATGGTGGTGGTTTTAGAGCTGCAAATGAAGCTGTTAATAAATATGGTCTACGTAGTACTCTCGAACATATTCGTTTGACTGGTTTTTTCCCTGTGTAA 1515 0.4112 MAPSSDHINHLSHPCIYGDYVSSHPERKSGFMKWLSKLFKGGSNRGRSGRHHYDPAEEGMSWRAPSRALDDRARAQKEKEDLGHAMSLSSAEDMKRPNAHQGYRWGEENDEDYGKALHDNFNSSAHPPYAPAPFYPNEYRRLCGGCNQEIIYGNCLGCMDTYFHPDCFRCHSCRSPITEREFSLSGKHPYHKSCFKELTHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPRNTKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMHMRIDQQVPMLLVEREALNDAIVGEKTGFHHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLIRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLSPEVEEGICQVLSYMWLESEVMPTTNSHCMASTSTAAASSSKKGAKSHVENKLGEFFKNQIVNDSSPAYGGGFRAANEAVNKYGLRSTLEHIRLTGFFPV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02200 504 Pfam LIM domain 143 196 IPR001781 -
Mepo7g02200 504 ProSiteProfiles LIM domain profile. 141 201 IPR001781 -
Mepo7g02200 504 SMART lim_4 142 194 IPR001781 -
Mepo7g02200 504 ProSitePatterns LIM zinc-binding domain signature. 143 177 IPR001781 -
Mepo7g02200 504 Pfam Protein DA1 292 499 IPR022087 -
Mepo7g02200 504 MobiDBLite consensus disorder prediction 47 86 - -
Mepo7g02200 504 CDD LIM_DA1 143 195 - -
Mepo7g02200 504 FunFam Protein DA1-related 2 131 196 - -
Mepo7g02200 504 MobiDBLite consensus disorder prediction 42 106 - -
Mepo7g02200 504 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 138 168 - -
Mepo7g02200 504 PANTHER PROTEIN DA1-RELATED 2 34 503 IPR045218 -
Mepo7g02200 504 Gene3D Cysteine Rich Protein 130 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02200 Mepo-Chr7 32677678 32682433 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo7g02200 DA1-like 2.2e-98 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02200 - - gmx:100784976 919.842