Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02197 ATGGTGACGTGGCCTTGTAGTGAAATTGAAGAGAGTGGGCAAGCAATGTGGTCAATCTTGCACTCTCTACTGGTCACTCTCTCTTGTATTGGGACACGTGGTTTGGGTTCTGCTGGTAGTGGGCTTAATGTTGCAAGCAGTTTGAATCTTCTGATTAGGTTTGGTACCTCCCAAGCTGTTATTTCATCCCAGTTGTTGTACACTCGTCTTCTTCATGGTTCCATTGAGCCGCCTGTTTTGTCCGTTGGCCCGCAGCAGGAAAAACACCCATGTAAGCTTCTCCTCCCTCTTCCCTATTCGTACCCCCTCGGTCTCTCTCCAAACAAGATCAGAGAAGACATCGCCAAAGAAACCGCAAAAGACTGGAAGGGTCTCCGTGTCACCGTCAAGCTTACTGTCCAGAATCGTCAAGCGAAGGTTGCTGTTGTTCCCTCCGCAGCGGCGCTTGTGATCAAGGCATTGAAGGAACCAGAGAAAGATAGGAAGCAGACAAATAATATTAAGCATAATGGGAATATCTCACTTGATGATGTTATTGAGATTGCGAAGATTATGAAGCCGAGATCTACGGCGAAGGAGCTTGCGGGTACTGTGAAGGAGATTCTTGGGACTTGTGTTTATGTTGGGTGTACTGTTGATGGGAAAGATCCGAAGGATTTGCAACAAATGATGGTGATGTTGAGATTCCTCTAG 693 0.469 MVTWPCSEIEESGQAMWSILHSLLVTLSCIGTRGLGSAGSGLNVASSLNLLIRFGTSQAVISSQLLYTRLLHGSIEPPVLSVGPQQEKHPCKLLLPLPYSYPLGLSPNKIREDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPEKDRKQTNNIKHNGNISLDDVIEIAKIMKPRSTAKELAGTVKEILGTCVYVGCTVDGKDPKDLQQMMVMLRFL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02197 230 SUPERFAMILY Ribosomal protein L11, C-terminal domain 144 217 IPR036769 -
Mepo7g02197 230 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 101 155 IPR036796 -
Mepo7g02197 230 FunFam 60S ribosomal protein L12 150 226 - -
Mepo7g02197 230 CDD Ribosomal_L11 102 212 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mepo7g02197 230 FunFam 60S ribosomal protein L12 119 149 - -
Mepo7g02197 230 Gene3D - 150 226 IPR036769 -
Mepo7g02197 230 Hamap 50S ribosomal protein L11 [rplK]. 44 214 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mepo7g02197 230 Pfam Ribosomal protein L11, RNA binding domain 143 212 IPR020783 GO:0003735|GO:0005840|GO:0006412
Mepo7g02197 230 PANTHER 60S RIBOSOMAL PROTEIN L12 102 219 IPR000911 GO:0003735|GO:0005840|GO:0006412
Mepo7g02197 230 Gene3D - 94 149 IPR036796 -
Mepo7g02197 230 SMART rl11c 91 213 IPR000911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02197 Mepo-Chr7 32584087 32587461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02197 98 222 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 85.600 1.04e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02197 K02870 - cit:102627399 220.705