Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02175 ATGGAGGGATCTTACTCTGATCAGTATTGGTTTTGGATGAAGAGAAGGCAAGTTCAAGCACCAATTGAATCATGGGAAGAAAAGGCTTTTGCAGAAGATGCAGCTAGGAATATACTGAATGGTAGCATGTGGCCACCAAGATTCTATTCATGTAACTTTTGTAAAAGAGAGTTTAGGTCTGCTCAAGCTCTTGGTGGTCACATGAATATTCATAGGAGAGATAGAGCTAGGCTTAAACAAAATCTTAGCCCTCAGAAGAACAATGATTTGATCAACTCATCACTAGGTAATCATTATTTTTCTGCAAAAGTGTCATCAAAACCTTGTTCTAGCCCTGCAACAACTTTAATTACAACTAGAAGAAGATCCCTTTCACCTTCTAGAATTATCTCAACTATTGTCAATGCTAGAGAACACAAATTTTTGGATTGTAATGATTGTGTTGAAACAAGTTTGTCTTTAGGAATGTTTGGACAAAAATCATCAACTGTACTTCCTTGTGAGGAAAAAGGTATCAGTTGTAAGAGATTGAAGACTAATAACATTTCTTCATTGCCTTCTGTTTTCCTCAAGACATGTTCAAATGATCATCATAGGTTCCTGGCTTTTCAACAACCTTCAGAAATTGTACTTGGAGTTAATCATGGAATGGAAGATTTAGATCTTGAACTCAGGTTGGGGAAACAACAGAAAATTATTAAGTAG 705 0.3603 MEGSYSDQYWFWMKRRQVQAPIESWEEKAFAEDAARNILNGSMWPPRFYSCNFCKREFRSAQALGGHMNIHRRDRARLKQNLSPQKNNDLINSSLGNHYFSAKVSSKPCSSPATTLITTRRRSLSPSRIISTIVNAREHKFLDCNDCVETSLSLGMFGQKSSTVLPCEEKGISCKRLKTNNISSLPSVFLKTCSNDHHRFLAFQQPSEIVLGVNHGMEDLDLELRLGKQQKIIK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02175 234 Gene3D Classic Zinc Finger 42 103 - -
Mepo7g02175 234 PANTHER OS07G0101800 PROTEIN 23 229 - -
Mepo7g02175 234 SMART c2h2final6 49 71 IPR013087 -
Mepo7g02175 234 SUPERFAMILY beta-beta-alpha zinc fingers 46 75 IPR036236 -
Mepo7g02175 234 Pfam C2H2-type zinc finger 49 73 - -
Mepo7g02175 234 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Mepo7g02175 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02175 Mepo-Chr7 32366123 32366827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02175 6 227 C2H2 Transcription Factor Family AT5G06070 35.470 1.19e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo7g02175 zf-C2H2_6 2.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02175 - - tpra:123922631 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02175 7 32366123 32366827 Mepo7g02175 7 32366123 32366827 ECH
Mepo3g05449 3 68222330 68223172 Mepo7g02175 7 32366123 32366827 PCT