Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02148 ATGAGGAGGAACAGTCCAGGTTATTACAGTCCTCCACGGAGAGGATACGGCGGAAGGGGTGGCGGTGGAGGTGGTGGTGGTAGGAGAGGATACGGTGGTGGTGGTGGTGGAGGTGGAGGTAGACGTAGAGAAAGCAACAATGGAAGTCTTTTGGTGAGGAACATTCCTTTGGATTGTAGACCTGAGGAGCTGAGAGCGCCGTTCGAGCGATTTGGACCCGTTCGTGATGTTTACATACCGAAGGATTATTACTCTGGACAACCTCGAGGCTTTGCATTCGTGCAGTTTGTGGATGCATATGAGGCCTCTGAGGCGCAGTACCATATGGACAGACAAATTTTTGCTGGAAGGGAAATATCTGTTGTTGTGGCTGCAGAGACAAGAAAAAGGCCAGAGGAGATGCGTCATAGGACTAGTAGGTCCAGAGGACCAGGAGGGAGCTATGGAGGGCAAAGGTCTTCCTACCACGGGCGTTCTCGATCTCGCTCAATTTCCAGATCAAGATCACCTCCTTATCACTCTGGTTCTAGAAACCGCTATCGCTCAAGGTCCAGGTCCTTCTCTCCTGCCCCAAGAAGGCAAGGTGACTACTCTGTTTCTCCTAGAAGGCATGCAGAACGCCCTAGATCACCTAGAAGTCCTCCTAGAAGTCCTCCTGTGGAGCGAGATGGAGATCATAAACGCAGGTCGTATTCTCCTCCAGGTTATGGCAATGATGTTGATCAGAATCAAAGCAATGGATATGCTGAGAAATCTGTGTACAAATCGGAGGCGGATAGAGGCCAGTGGAAGTCATCAAGATCACCCCCAGGATCTAGATCTAGATCAAGATCTGCTGATTTGTCACCTAGACGTGGGAGATGA 864 0.5035 MRRNSPGYYSPPRRGYGGRGGGGGGGGRRGYGGGGGGGGGRRRESNNGSLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEAQYHMDRQIFAGREISVVVAAETRKRPEEMRHRTSRSRGPGGSYGGQRSSYHGRSRSRSISRSRSPPYHSGSRNRYRSRSRSFSPAPRRQGDYSVSPRRHAERPRSPRSPPRSPPVERDGDHKRRSYSPPGYGNDVDQNQSNGYAEKSVYKSEADRGQWKSSRSPPGSRSRSRSADLSPRRGR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02148 287 MobiDBLite consensus disorder prediction 236 251 - -
Mepo7g02148 287 FunFam Serine/arginine-rich SC35-like splicing factor SCL30 isoform A 41 184 - -
Mepo7g02148 287 MobiDBLite consensus disorder prediction 1 49 - -
Mepo7g02148 287 SUPERFAMILY RNA-binding domain, RBD 44 153 IPR035979 GO:0003676
Mepo7g02148 287 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 42 241 - -
Mepo7g02148 287 Gene3D - 40 163 IPR012677 -
Mepo7g02148 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 126 IPR000504 GO:0003723
Mepo7g02148 287 MobiDBLite consensus disorder prediction 127 287 - -
Mepo7g02148 287 MobiDBLite consensus disorder prediction 197 232 - -
Mepo7g02148 287 MobiDBLite consensus disorder prediction 144 193 - -
Mepo7g02148 287 SMART rrm1_1 49 122 IPR000504 GO:0003723
Mepo7g02148 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 119 IPR000504 GO:0003723
Mepo7g02148 287 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02148 Mepo-Chr7 31957297 31961641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02148 38 97 Eukaryotic Initiation Factors Gene Family AT3G11400 40.000 6.90e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02148 K12900 - gmx:100804294 322.013