Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02146 ATGGGTTGTTGCCTTAGTGCTAGAATCAAAGCTGAAAGCCCTCCACGTAATGGTTCGAGTTCGAAGGACAGAAGCAGAGAAAATGGCTTGAGTGGTCGAAGCAGTGGCAAGGTCTCGACTGTGCCTACTGCCCCTCCAACTCCTCGAACCGAGGGCGAGATCTTGAAGTCTTCCAATATGAAGAGCTTCACTTTTAGTGAGCTAAAAACTGCTACAAGAAACTTTCGTCCCGATAGTGTGGTTGGTGAAGGTGGATTTGGAGCTGTATTTAAGGGGTGGATCGATGAGCACACACTTGTACCGGTTAGACCAGGGACTGGAGTTGTCATTGCTGTCAAGAGGCTTAACCAAGAAGGTTTACAAGGACACAGTGAGTGGTTGACAGAAATCAATTACCTGGGACAACTGCATCATCCTAATCTTGTGAAACTGATCGGTTACTGCTTCGAAGATGAACATCGGCTTTTGGTTTACGAGTTTTTGACCAAAGGCAGTTTGGATAATCACTTATTTCGAAGAGCTTCTTATTTTCAACCACTTTCTTGGACCATCCGAATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATATCTTCACAGCGATGAAGCAAAAGTGATATATCGTGACTTCAAAACTTCAAATATACTGCTCGACACAAATTATAATGCAAAACTTTCCGATTTTGGATTGGCTAAGGATGGACCGGCAGGTGATAATAGTCATGTCTCTACAAGGGTTATGGGCACATACGGCTATGCCGCTCCTGAATATATGGCCACAGGTCATTTGACCAAAAAGAGTGATGTATACAGTTTCGGAGTTGTGCTCCTTGAAATTATGTCCGGCAAACGTGCACTCGACAACAACAGGCCATCTGGGGAACACAATTTAATTGAATGGGCCAAACCTTACCTCAACAGCAAACGCCGGGTCTTCCAAGTTATGGATGCTCGCATTGAAGGCCAATACACACTGCGTCAAGCAATGAAAGTAGCTGACCTTGCAGTTCGATGCCTGTCCGTTGAACCAAGATTCAGACCGAAAATGGACGAGATTGTAAGAGTATTGGAGGAACTTCAGGGTTCTTCTGTTGAGACGACCGGAGGAGTAGGAAGCTCGCGAGATCAAAATATTAAAAGGAGTGTCCATAGCTCAAGGAACAACAACGGTCCAAGACAACATAGAAGTAATAGGCCAAGTGTAACAATAAACAATGAATTATTAGTTATGTAG 1236 0.4434 MGCCLSARIKAESPPRNGSSSKDRSRENGLSGRSSGKVSTVPTAPPTPRTEGEILKSSNMKSFTFSELKTATRNFRPDSVVGEGGFGAVFKGWIDEHTLVPVRPGTGVVIAVKRLNQEGLQGHSEWLTEINYLGQLHHPNLVKLIGYCFEDEHRLLVYEFLTKGSLDNHLFRRASYFQPLSWTIRMKVALDAAKGLAYLHSDEAKVIYRDFKTSNILLDTNYNAKLSDFGLAKDGPAGDNSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRALDNNRPSGEHNLIEWAKPYLNSKRRVFQVMDARIEGQYTLRQAMKVADLAVRCLSVEPRFRPKMDEIVRVLEELQGSSVETTGGVGSSRDQNIKRSVHSSRNNNGPRQHRSNRPSVTINNELLVM 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02146 411 MobiDBLite consensus disorder prediction 365 405 - -
Mepo7g02146 411 SUPERFAMILY Protein kinase-like (PK-like) 49 357 IPR011009 -
Mepo7g02146 411 FunFam Serine/threonine-protein kinase BIK1 43 160 - -
Mepo7g02146 411 MobiDBLite consensus disorder prediction 1 56 - -
Mepo7g02146 411 CDD STKc_IRAK 81 360 - -
Mepo7g02146 411 FunFam Probable serine/threonine-protein kinase PBL8 161 376 - -
Mepo7g02146 411 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Mepo7g02146 411 Pfam Protein tyrosine and serine/threonine kinase 79 357 IPR001245 GO:0004672|GO:0006468
Mepo7g02146 411 PANTHER OS01G0588500 PROTEIN-RELATED 30 361 - -
Mepo7g02146 411 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g02146 411 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Mepo7g02146 411 MobiDBLite consensus disorder prediction 31 56 - -
Mepo7g02146 411 Gene3D Transferase(Phosphotransferase) domain 1 161 380 - -
Mepo7g02146 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02146 Mepo-Chr7 31945939 31949113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02146 15 357 Glycoside Hydrolase AT3G07070 45.915 3.51e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo7g02146 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02146 - - gmx:100775335 682.174