Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02133 ATGGAAACATCAGAGAATTCTCTTCCAACGTTGGAGGACCAAAATACATCGGTGTCCGTACGGAGAGCCTTGGAGCTACTCCATCTGGACAACCAGGACATGAAAATTCAGGCTGCCAAGGACATCCGCCGTCTCACCAAAACCTCCCACCGTTGCCGCCGTCAGCTCCAACCAGCTATCACTCCACTTGTTTCCATGCTTCGGGTCGACTGGCCGGAGTCCCATGAACCTGCTCTTCTCGCCTTGCTTAACCTTGCTGTTCAAGATGAAAAGAACAAAATCAACATTGTGGAAGCTGGTGCATTAGAACCAATAGTTAATTTTCTCAAGTCACAAAATCAAAATCTACAAGAGTATGCAACTGCATCATTGCTCACTCTATCTGCATCAACAACCAACAAATCAATCATCACTTCTTATGAAACAATTCCTCTTCTTGTTAACATTCTTAGAAATGGAAGCCAGCAAGCTAAATCTGATGCAGTAATGGCTCTATCCAATTTATCAACACACCATGATAACCTCAACACTATACTAGAATCAAATCCAATTCCTTTAATAATTAACATTCTCAAAACATGTAAAAAGTCCTCAAAAACAGCTGAAAAATGCTGCGGTTTGATAGAGTCGTTGGTCGATTATGAAGAAGGAAGAGTTTCCTTATCATCCGAAGAAGGCGGTGTTCTTGCAGTAGTTGAAGTTCTTGAAAATGGAAATCCACAAAGTAAAGAACATGCTGTTGGAACATTGTTGAGAATGTGTCAAAGTGATAGGTGTAAATATAGGGAACCAATTTTAAGAGAAGGTGTTATTCCAGGACTTCTTGAACTAACTGTTCAAGGAACAGCAAAGTCTAAGGCAAAAGCATGTACACTTTTGCAGCTACTAAGAGATTCTGATGTTGAAACAAGATGTGAAATTGAAGGTGAGACTCTTGAGAACATAGTATATGATATTATATCTCAGATTGATGGTGATGAACAATTTGGTAAAGCAAAGAAGATGTTAGATGAAATGGTTCAAGTTAGTATGGAACAAAGTTTGAGACATTTACAACAGAGGGCTCTTGTTTCTACCACAAGTGATGTGTCTATTACTAGTTGTGCTTCTGAAACTTAA 1119 0.3941 METSENSLPTLEDQNTSVSVRRALELLHLDNQDMKIQAAKDIRRLTKTSHRCRRQLQPAITPLVSMLRVDWPESHEPALLALLNLAVQDEKNKINIVEAGALEPIVNFLKSQNQNLQEYATASLLTLSASTTNKSIITSYETIPLLVNILRNGSQQAKSDAVMALSNLSTHHDNLNTILESNPIPLIINILKTCKKSSKTAEKCCGLIESLVDYEEGRVSLSSEEGGVLAVVEVLENGNPQSKEHAVGTLLRMCQSDRCKYREPILREGVIPGLLELTVQGTAKSKAKACTLLQLLRDSDVETRCEIEGETLENIVYDIISQIDGDEQFGKAKKMLDEMVQVSMEQSLRHLQQRALVSTTSDVSITSCASET 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02133 372 SUPERFAMILY ARM repeat 21 307 IPR016024 -
Mepo7g02133 372 FunFam U-box domain-containing protein 4 5 357 - -
Mepo7g02133 372 Gene3D - 12 359 IPR011989 -
Mepo7g02133 372 PANTHER U BOX DOMAIN-CONTAINING 20 298 - -
Mepo7g02133 372 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 141 183 IPR000225 GO:0005515
Mepo7g02133 372 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 100 137 IPR000225 GO:0005515
Mepo7g02133 372 SMART arm_5 89 129 IPR000225 GO:0005515
Mepo7g02133 372 SMART arm_5 46 87 IPR000225 GO:0005515
Mepo7g02133 372 SMART arm_5 130 170 IPR000225 GO:0005515
Mepo7g02133 372 SMART arm_5 171 213 IPR000225 GO:0005515
Mepo7g02133 372 Pfam Armadillo/beta-catenin-like repeat 90 128 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02133 Mepo-Chr7 31825685 31829174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02133 2 298 U-box Gene Family AT3G54790 35.099 1.50e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02133 - - gmx:100780954 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02133 7 31825685 31829174 Mepo7g02133 7 31825685 31829174 ECH
Mepo3g05411 3 67730281 67734204 Mepo7g02133 7 31825685 31829174 PCT