Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02122 ATGGCCAACCAATATTGTTTAGGAAATCGTCAGAATGAAGAAAGGAGCCCATATCGTGATGCAATATATTTAATACTTTTTGGGTCAAATATTAGCATCATTCCTACTACTACTCACAATGCTTTAGAAGGCAACAACACTTCTCCCTTTATCAATAGAGGACCGAGAAGTGTGTCGTCCATCTTGGCTAGAGATAATATGTCATTATCCTCCTTATATCCGGCTATTGCAGGACAAACTGGAGCTGCACCTGTTGTAGGATCCGATTATCAAAGAAGTGGAGCTGTTGTAGGAAATAGTAGTAATGTTAACTCCATTTCGTCATTCAATAATAGAATTAACACCACTACCGGTACTAGGAATGATGAGTTGTGTCGGGCTAATTCATCGTTCAAGAGAAGCAGATCGCCTGATCCATTCACTAGAGGTGAAACTTCTAATCAAGGTTCAGAAATTGATGGAAGGTTTAGCAGAAGACGCACTCTTCCTCCTCCTTTTCATCCTTATCAAGACAATGTCAACAACATGTCTTCTTTACCTACAACAACATTTAGGGATCCTTTCATCATGGATGAAGATACTAATGTAGACGCAGGACTAAGTAGTAGTAGTAGTACTACTACTACTCAGTCTGAAATTAATAGCTCGCCTGGTGGTCCAGCAGGTTTTTTCGGAAATCATGATTCATCTCATTATAGTTTTCCCACTAGGTCACTCAATAATCTTAGTAGATTACGTCTTCAAGAAGATCCTTCGACGAACTTACTTAGAGGAAGACAAGATCTATATCCTACCTCTACATCATTTCTATATCCCTATGCAGTAACAAGAGGGGCAGCAAGTTCTTCTTCTCAAGGCACAAGTTTTAGCCAGAATGGTGATAATAGCAATAACTTGGACTTCTTTGATACCTTTATTCAACAAGGAATGGACAATGCTTACGTTGAAAGCACAACAATTGTTCAACAACATGTTAGGTTATTGACAGAAGGTCGTGTGAATCAAACTCCTTCTCCAACTATTGTTCCTGTGTGGCCTAGTAATTTTGTACCACCACGACAATCAATAACGACTTCAAACCCTTCAACGAGTAATTATCAACTAAACCGTTCTCTATCTCTTCCTAGATCGGGATTTACTATTGCTACACAAACTATTCAGTTCATTCACACTGGTTCAGGATCACAAAGATCAGAGACTGTAGCTCAATCTAGCGATAGTTACCGCAATTTAATTTCAACTTCTCGTGAACTTTCAATAGAGAGGGACATGCTCAGGGTTGAGTGCAATTTGCTACTTGATTACTGGGCCACTCAAAATCAGCTACTTCACTCTCAAGAGCACATAGATTGGCTAACTAATTCAGAGGATTGGCAGGACGAGATGATTGGGGTGGGGCTGGAAGAGGAGGAAATTCTCATGTACATCCAGCAAGAAACTTACCAGCCTAATACTGAGGAAACAAGCACAATGAATCAAACTTGCACCATATGTCAGGAAGATTTTATTGATGGGGATCGTATTGGGAGACTTGATTGCAATCACATATATCATCTTGACTGCATCAAACAATGGTTGGAGGTAAAGAATGATTGTCCAATCTGTAAGGAGACGGCTCTGAAAATTTATGAAGATGATGATGATGATGATGATGATGATGAAAGTGAAGATGAATAA 1677 0.3936 MANQYCLGNRQNEERSPYRDAIYLILFGSNISIIPTTTHNALEGNNTSPFINRGPRSVSSILARDNMSLSSLYPAIAGQTGAAPVVGSDYQRSGAVVGNSSNVNSISSFNNRINTTTGTRNDELCRANSSFKRSRSPDPFTRGETSNQGSEIDGRFSRRRTLPPPFHPYQDNVNNMSSLPTTTFRDPFIMDEDTNVDAGLSSSSSTTTTQSEINSSPGGPAGFFGNHDSSHYSFPTRSLNNLSRLRLQEDPSTNLLRGRQDLYPTSTSFLYPYAVTRGAASSSSQGTSFSQNGDNSNNLDFFDTFIQQGMDNAYVESTTIVQQHVRLLTEGRVNQTPSPTIVPVWPSNFVPPRQSITTSNPSTSNYQLNRSLSLPRSGFTIATQTIQFIHTGSGSQRSETVAQSSDSYRNLISTSRELSIERDMLRVECNLLLDYWATQNQLLHSQEHIDWLTNSEDWQDEMIGVGLEEEEILMYIQQETYQPNTEETSTMNQTCTICQEDFIDGDRIGRLDCNHIYHLDCIKQWLEVKNDCPICKETALKIYEDDDDDDDDDESEDE 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02122 558 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 459 540 IPR013083 -
Mepo7g02122 558 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 126 540 IPR045191 GO:0061630
Mepo7g02122 558 CDD RING-H2_RNF24-like 493 536 - -
Mepo7g02122 558 MobiDBLite consensus disorder prediction 168 184 - -
Mepo7g02122 558 MobiDBLite consensus disorder prediction 196 217 - -
Mepo7g02122 558 MobiDBLite consensus disorder prediction 117 152 - -
Mepo7g02122 558 ProSiteProfiles Zinc finger RING-type profile. 495 536 IPR001841 -
Mepo7g02122 558 SUPERFAMILY RING/U-box 494 541 - -
Mepo7g02122 558 SMART ring_2 495 535 IPR001841 -
Mepo7g02122 558 Pfam Ring finger domain 494 536 IPR001841 -
Mepo7g02122 558 MobiDBLite consensus disorder prediction 117 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02122 Mepo-Chr7 31654549 31657422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02122 463 541 C3H Transcription Factor Family AT2G15530 43.902 1.03e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02122 - - mtr:11405780 403.675