Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02078 ATGGAAGCTTCACATGAAAGAGAGAGAATCGATCAATGCTTCAATTTTTTCCATCAACAACAACAACCCACCATGTCATTCTCCATCATCGACGCTTCAAAGAAGCGAAAACGATGGACAAAGATTTTCCCGCTACAATCATTCGCTGACCCTGGTTGTCCAATTTCACCTTCAGGTCCGTTCCGCGAAAATGTTCGACTTTTTCTTCGAGAAGCTGGTGAGCTTGAAGATTATACGGTTATGGGGAATCCTCTTTGGTGCACTTTTCTGATTCATGAAAAGAAGAATCTAATGGTTCCTTTCTATGCTCTTGAAGAAGAAGTTTATAACTCTTCTCATCCTTTCTGTGATCATTGCCGTTGTGTAGGTTGGAGTGGACATTTTGTATCAAAGAGAAGGTACCATTTTATAATCCCAATGGATGATGGGTGGCATAAACCCTTAAATGAAGAAGCTCTTGATGATCAGAGTCATCTATTACATGGTGTGATTCATTGCAATGGTTATGGCCATTTGGTATGTCTTAATGGCATTGAAGGTGGTTCCAAATTTCTTAGTGGGAGAGAAATCATGGATCTATGGGACAGAATTTGCACCAATCTTAGAGCAAGGTACATTGCAGTTGAAGATGCTTCAAGGAAAAGGTCAATGGATCTTCGCTTACTTCATGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGGGTTATGGTTTTTGCCGTGGAAGCTTTGGTGTGACAGAACACAACTATAATGAAGCTATTGAAACTCTTGGTTCATTAGTTCTTGATGATATTGTAAGAGATTTGAGTAAGACAAAGTACCACAAAGATGTCAAGCAAATGATTCGTTTCTATAGAGATATGAGTGAAACTCATATCATCACAATAAGGGAGCTTCTAAGATTTATGCTCACTGTCAAGTCCCGTAGACCAGTGTCGAAAATGACAGTCACTTGTTCTTCTCCTAATGCTGTTTCTGACACTGATCCACCTTCTTGTTCTACTTCAACATTTATGTCGAGAAATGCAACCAAACCTGCACTTTCAAGTAGTAGATCAAATTTCACAATGAAGGAAAAATCAGCTAGGTATAAGAAATTCAGCACTGCAATAGCTAATATGGATAGTAGGTGGCCGACAAGGAGACTAGAGTTTGCAGCTCAAGTGATTGTGGAAGCATTAAAAGAGGACAAAGCTATGAAACCAGGCTCTAGTGGAATGACAAGACAAGATGTGAGGGATGCAGCTAGGCTTCACATTGGTGATACTGGTTTACTTGATTATGTGCTGAAATCACTTAACAATGTGATTGTTGGAAACTATGTAGTTCGCCGCACGGTCAATTCTTCCTCAAGGATCCTTGAATATACAATTGATGAGCTCAGCAAAGGGCTCCAAGCACCTGAAATGGAACATGGTGTAGTGACAATTGCAGATAATCCTAAAGTCGAGTCATCATCATTATCATCATCATTATCTTTGGTGCCTGATAATGATGTTTACAGTGATGTAGTTTATCTTTACAAGAATGTGTTGTTGGGTTATCCAGATTCAGAGGCAGTGGAATCAGCAGTTCAAACAATTCTTGACTGCAGACACTTTGTGAAAGAGTGGAAATTGAGAGATGAAATGGAACAAGTTTTGACATTTATTTGCCATTTGAAACCGAATTTCGTTGAGAATAAGTCTGATTTAAAAGGGCCATCTTGTGGTGAGATTGTAACTGTTCCATTGCATGCAACAGTTAGAGACTTAAAGCAAACTGCTGAGGCTGCATTAAGGGACACATATTGCATAGCTGAAAGACTCATAGTGACAGATATCAAAGAATTGATGGATGTGGAAGATGAAGAAGTGATTTTTGGACAGATTGAATCTGGTGTGAAGCTTTCTGTAAGGGGAATTGGCATTGATTTGTATACTCCATTGAAATATCAAGGAGGAAGTGATAATTGGAAAGTGAGGTGTGAGTGTGGAGCACAAGATGATGATGGTGAGAGAATGGTGGCTTGTGATATTTGTGAAGTGTGGCAGCATACAAGATGTTGTGGAATAGATGATTCTGAGACAGTTCCACCTTTGTTTGTCTGTTCTGGATGCTGTGATTCACTTATGCCACCAAGGATTGAATCTAGCAGCTTTGGTATGCTGGATTGTGCTGATTCTTTTCTTGTTTCACCTGAGCCTACTCATTTGTTGGAGTATGGTTATGGATATTGA 2223 0.3963 MEASHERERIDQCFNFFHQQQQPTMSFSIIDASKKRKRWTKIFPLQSFADPGCPISPSGPFRENVRLFLREAGELEDYTVMGNPLWCTFLIHEKKNLMVPFYALEEEVYNSSHPFCDHCRCVGWSGHFVSKRRYHFIIPMDDGWHKPLNEEALDDQSHLLHGVIHCNGYGHLVCLNGIEGGSKFLSGREIMDLWDRICTNLRARYIAVEDASRKRSMDLRLLHGVAYGHSWFGRWGYGFCRGSFGVTEHNYNEAIETLGSLVLDDIVRDLSKTKYHKDVKQMIRFYRDMSETHIITIRELLRFMLTVKSRRPVSKMTVTCSSPNAVSDTDPPSCSTSTFMSRNATKPALSSSRSNFTMKEKSARYKKFSTAIANMDSRWPTRRLEFAAQVIVEALKEDKAMKPGSSGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRTVNSSSRILEYTIDELSKGLQAPEMEHGVVTIADNPKVESSSLSSSLSLVPDNDVYSDVVYLYKNVLLGYPDSEAVESAVQTILDCRHFVKEWKLRDEMEQVLTFICHLKPNFVENKSDLKGPSCGEIVTVPLHATVRDLKQTAEAALRDTYCIAERLIVTDIKELMDVEDEEVIFGQIESGVKLSVRGIGIDLYTPLKYQGGSDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDSLMPPRIESSSFGMLDCADSFLVSPEPTHLLEYGYGY 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02078 740 ProSitePatterns Zinc finger PHD-type signature. 657 701 IPR019786 -
Mepo7g02078 740 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 644 705 IPR013083 -
Mepo7g02078 740 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 36 713 - -
Mepo7g02078 740 MobiDBLite consensus disorder prediction 319 341 - -
Mepo7g02078 740 SUPERFAMILY FYVE/PHD zinc finger 649 707 IPR011011 -
Mepo7g02078 740 SMART PHD_3 656 702 IPR001965 -
Mepo7g02078 740 CDD PHD_MMD1_like 657 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02078 Mepo-Chr7 31127634 31130596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02078 18 707 PHD Transcription Factor Family AT5G22260 33.333 6.37e-120 373