Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02053 ATGTCTTCGTCGGAGCCTAAGTACAACACCCCACCGGCCCCAACATACAAGACCCCACCGGCACTAGTAGCCTTCACCCTCACCGTCCTCATCTTATGCTTTGTGGCTTTCAGCATTGTGTATCTTTGCAAGTATTGTTTTGCAGGCCTTTTCCACACTTGGGCCTTACAACGCACGGCCTCGGGTTCCCTCGTTCGTCTCTCACCTGATAGGTCACCCCCTAGAGGACTCGATAATACCCTTCTAGAAAAATTCCCCACTTTCCTCTACTCCTCCGTGAAAGACCTCCGCAAGGAAAAGAGTTATAGCTTAGAATGTGCCATTTGCTTGCTAGAGTTTGATGATGATAGCATGCTTCGTCTCCTAACCCTTTGTTCCCATGTTTTCCACCAAGAATGTATTGACCTATGGCTTGAATCTCATAAGACATGCCCCGTTTGTCGAACAGACCTTGATTCACCTCCCAACCAAATGTCAAAGCACGGGGAATGCAACCACAACAACAACAATAACAACCTTATTGCACAAGAGGGTATGCCATCGTTACCGTGTGATGATATACACATTGATGTTAGAGGAGAGGAAAGTGACAATGTTGGTGAGATCACTAGAGCTCAAATACATGAAGGTGATCAACATGATCATCATGTGGGTATGAGCATGCAACAACACGAAGATCATAGATTTTCAAGGTCACATTCAACGGGACATTCTATAGTAACTATTAGAGGTGAAGAAAAAGATCATGAGAAATATACATTGAGATTGCCTGAACATGTTATAAGGGGAGGACACAATTACACGAGGAGTTGCACAAATTACAACGAGATGAAATTGACAATACCTACACCTTGTAGTAATTGTGGTTTTGTTAAACCGGTTATTGGCTCCTCTTCACTTGCTTGTGCTCAAGAGGCTTGA 921 0.4408 MSSSEPKYNTPPAPTYKTPPALVAFTLTVLILCFVAFSIVYLCKYCFAGLFHTWALQRTASGSLVRLSPDRSPPRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTLCSHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGECNHNNNNNNLIAQEGMPSLPCDDIHIDVRGEESDNVGEITRAQIHEGDQHDHHVGMSMQQHEDHRFSRSHSTGHSIVTIRGEEKDHEKYTLRLPEHVIRGGHNYTRSCTNYNEMKLTIPTPCSNCGFVKPVIGSSSLACAQEA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02053 306 Pfam Ring finger domain 105 148 IPR001841 -
Mepo7g02053 306 SUPERFAMILY RING/U-box 82 156 - -
Mepo7g02053 306 PANTHER RING FINGER DOMAIN-CONTAINING 9 156 - -
Mepo7g02053 306 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Mepo7g02053 306 SMART ring_2 106 147 IPR001841 -
Mepo7g02053 306 FunFam E3 ubiquitin-protein ligase ATL6 66 154 - -
Mepo7g02053 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 154 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02053 Mepo-Chr7 30857438 30858358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02053 1 277 C3H Transcription Factor Family AT2G35420 32.394 1.90e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02053 - - gmx:100815505 332.798