Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02026 ATGGATGACGGCACTGCAGGACTTGGACACGGGATGAGTTTTGGAGCACTTCCTGAAGCTCTTTTCGAGGAAGCTTGTGAAGGACTACGATCAAAACCTAACATCCATTCAAAACTCTCTTCTATTCTCTGCGACGGTGACAACAGTAGTAAGATGAATAGCAGCTCCGTTCCTATGCAAATATTCATAAACATCGAGTATGGAATGAAGAAGTTTCCCCTGATGGTTAAGAATTCAGACACGATACTCAGCGTTCAAGAGAAGATTCATGACAAGGAAAAGATCCCTGTGCATGATCAAGAACTTTACTTTTCCGATACGCCACTAGATTACCACCGGACCCTTGCCAGTTACAACATACAAGACAAGTCAACTATTGACCTCATTTTCCGCCTCATGGCGGACTAG 408 0.4387 MDDGTAGLGHGMSFGALPEALFEEACEGLRSKPNIHSKLSSILCDGDNSSKMNSSSVPMQIFINIEYGMKKFPLMVKNSDTILSVQEKIHDKEKIPVHDQELYFSDTPLDYHRTLASYNIQDKSTIDLIFRLMAD 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02026 135 PANTHER UBIQUITIN 59 132 - -
Mepo7g02026 135 PRINTS Ubiquitin signature 91 111 IPR019956 -
Mepo7g02026 135 PRINTS Ubiquitin signature 112 133 IPR019956 -
Mepo7g02026 135 PRINTS Ubiquitin signature 70 90 IPR019956 -
Mepo7g02026 135 Pfam Ubiquitin family 69 131 IPR000626 GO:0005515
Mepo7g02026 135 SMART ubq_7 59 131 IPR000626 GO:0005515
Mepo7g02026 135 ProSiteProfiles Ubiquitin domain profile. 59 135 IPR000626 GO:0005515
Mepo7g02026 135 SUPERFAMILY Ubiquitin-like 44 132 IPR029071 -
Mepo7g02026 135 Gene3D - 57 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02026 Mepo-Chr7 30504675 30506269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02026 59 132 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 50.000 5.58e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02026 - K08770 mtr:11432566 93.5893