Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02025 ATGAATAGCAGCAGCTCCGTTTCTATGCAAATATTCATAGACATCATGTTTGAAAACAAGAGGTTCCCCCTGATGGTTAAGAGTTCAGACACAATACTTGATGTGAAGAAGAAGATTCAGGACAAGGAAGGGATCCAAGTGCACGGATATGACTTGTTCTTTGACAATAAGGTGCTGTGTTCCCACCACCACACCCTTGCCAATTACAACATCCAAGATAATTCAACTATTGACCTCGTTGTCCGTATGATGGCGGATTAG 261 0.4215 MNSSSSVSMQIFIDIMFENKRFPLMVKSSDTILDVKKKIQDKEGIQVHGYDLFFDNKVLCSHHHTLANYNIQDNSTIDLVVRMMAD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02025 86 PANTHER UBIQUITIN 9 83 - -
Mepo7g02025 86 SMART ubq_7 9 82 IPR000626 GO:0005515
Mepo7g02025 86 ProSiteProfiles Ubiquitin domain profile. 9 86 IPR000626 GO:0005515
Mepo7g02025 86 SUPERFAMILY Ubiquitin-like 8 83 IPR029071 -
Mepo7g02025 86 Pfam Ubiquitin family 11 83 IPR000626 GO:0005515
Mepo7g02025 86 Gene3D - 2 86 - -
Mepo7g02025 86 PRINTS Ubiquitin signature 63 84 IPR019956 -
Mepo7g02025 86 PRINTS Ubiquitin signature 20 40 IPR019956 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02025 Mepo-Chr7 30502211 30502798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02025 9 85 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 49.351 5.00e-14 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02025 - K02927 mtr:11432566 93.9745