Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02021 ATGAAGCTTTCAACATCAGGAATGAGTCAGCAGGGTCATGAAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCCTTAGTTTCTCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAAGGTCATAGTGAGCAGGTTTCTGCCACAACCAACAGAGAAATTGATGGACAAATACCGAATTATCCTAGTTTACCGCCTCAGTTGATATGCCAACTTCATAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACGCTACAGCCGTTGACTCCGCAAGAGCAGAAAGATACGTTTCTTCCTATGGAATTGGGGATTCCAAGTAAGCAGCCTACAAATTATTTTTGCAAGACATTGACGGCGAGTGATACAAGCACACATGGAGGGTTCTCCGTTCCTCGTCGTGCAGCTGAGAAAGTTTTTCCTCCATTGGATTTCTCACAGCAACCTCCTGCTCAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGACATATTTTTCGAGGACAGCCAAAACGACATCTTCTTACCACAGGCTGGAGTGTATTTGTTAGTGCAAAAAGACTAGTAGCTGGAGATTCTGTGCTTTTCATTTGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAGTAGGCCACAAACTGTTATGCCATCATCAGTTCTTTCAAGTGATAGCATGCACATTGGACTTCTTGCAGCTGCAGCACATGCTGCTGCAACTAATAGCTGCTTTACGGTGTTCTTTAATCCAAGGGCTAGTCCATCCGAGTTCGTCATACCACTCTCAAAATATATCAAAGCTGTGTACCATACACGCGTTTCTGTCGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGCACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCCAAATTCTCATTGGAGGTCTGTTAAGGTTGGTTGGGATGAATCGACAGCTGGGGAGAGACAGCCACGGGTATCGTTATGGGAAATTGAGCCTTTAACTACATTTCCAATGTATCCATCACTATTTCCCCTTAGATTGAAACGACCATGGCATCCTGGCACTTCTTCTTTTCTTGATGGCAGAGATGAGGCAACTAATGGACTAATGTGGATGCGAGGCGGTCCCGGAGACCATGGTCTTAATTCCATGAATTTTCAAGGTGCTGGATTGTTACCCTGGATGCAGCCAAGAATCGATCCAACTTTGCTAGGAAACGATCATAATCAGCAATACCAAGCCATGTTAGCTGCTGCTGGTTTGCAGAACCAAGGGAATGTAGATCTATTAAGGCAACAGATGATGAACTTTCAACAGCCTTTCAATTATCAACAATCAGGAAACCTCAGTCCTATGCAGCTTCAGCAACAGCAAGCAATTCAACAATCCGTATCGACTAATAATATCATGCAACCACAAGGCCAAGGGTTGGTGGAGAATCTTTCTCAGCACATCCTTCAGAAATCGCACAACAATCGAGAAAACCAAACACAGCAACACAGTTATCAAGATTCAGTTTTAATTCAAGGTGATCCGCTCCATCAGAAGCAACACTCTAGTTTGCCTTCACCGTCATACTCAAAACCAGATTTCATAGATTCAGGCATGAAGTTTTCTGCTTCAGTTTCACCAGGTCAAAACATGCTTGGTTCACTTTGTTCTGAAGGGAGTGGCAATCTGTTGAATTTATCCAGAAGTGGTCATTCTATGCTGACTGAACAGTCACCTCAACAATCATGGGCCTCAAAGTATTCACCTTCGCAGGTCGATGTCACTGGCAATTCGATGTCGCATGTGCAGTATTCCGGAAGAGATACATCAATTGTACCACCACATTGCAACTCAGATGCCCAAAATTCTGTTCTGTTTGGGGTCAATATCGATTCGTCTGGCCTTCTGCTCCCTACCACTGTCCCTCGTTATACTACTGCATCAGCTCATGCCGATGCATCGACAATGCCGTTAGGGCAGTCTAGTTTCCAGGGTTCTCCATATCCTTGTATGCAAGATTCATCGGAGTTGTTGCAAAGTGCAGGGCAAATTGATACGCAAAACCAGACACCGATATTTGTGAAGGTATACAAATCAGGTTCAGTAGGGCGCTCACTTGACATCTCGCGGTTCAACAGCTATCACGAGCTGCGGGAGGAGTTGGCTCAGATGTTTGGAATTGAGGGGAAATTTGAAGATCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTCAATAATGTTTGGTATATCAAAATACTTTCCCCTGAAGATATTCAGAAAATGGGAGAAGAAGCCATAGAATCCCTTGGTCCAAGTTCTGGACAAAGGATGAACAACACTGGTGCAGAATCTCACGACATTGTTTCTGGACTACCATCATTAGGCTCACTTGAATACTGA 2526 0.4438 MKLSTSGMSQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDEATNGLMWMRGGPGDHGLNSMNFQGAGLLPWMQPRIDPTLLGNDHNQQYQAMLAAAGLQNQGNVDLLRQQMMNFQQPFNYQQSGNLSPMQLQQQQAIQQSVSTNNIMQPQGQGLVENLSQHILQKSHNNRENQTQQHSYQDSVLIQGDPLHQKQHSSLPSPSYSKPDFIDSGMKFSASVSPGQNMLGSLCSEGSGNLLNLSRSGHSMLTEQSPQQSWASKYSPSQVDVTGNSMSHVQYSGRDTSIVPPHCNSDAQNSVLFGVNIDSSGLLLPTTVPRYTTASAHADASTMPLGQSSFQGSPYPCMQDSSELLQSAGQIDTQNQTPIFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEEAIESLGPSSGQRMNNTGAESHDIVSGLPSLGSLEY 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02021 841 SMART B3_2 128 230 IPR003340 GO:0003677
Mepo7g02021 841 Gene3D - 292 364 - -
Mepo7g02021 841 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo7g02021 841 Gene3D - 711 804 - -
Mepo7g02021 841 MobiDBLite consensus disorder prediction 810 841 - -
Mepo7g02021 841 FunFam Auxin response factor 710 804 - -
Mepo7g02021 841 Gene3D - 126 229 IPR015300 -
Mepo7g02021 841 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Mepo7g02021 841 ProSiteProfiles PB1 domain profile. 715 799 IPR000270 GO:0005515
Mepo7g02021 841 MobiDBLite consensus disorder prediction 813 828 - -
Mepo7g02021 841 FunFam Auxin response factor 292 364 - -
Mepo7g02021 841 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Mepo7g02021 841 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Mepo7g02021 841 CDD B3_DNA 127 228 IPR003340 GO:0003677
Mepo7g02021 841 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 804 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo7g02021 841 Pfam AUX/IAA family 709 799 IPR033389 -
Mepo7g02021 841 FunFam Auxin response factor 126 230 - -
Mepo7g02021 841 SUPERFAMILY CAD & PB1 domains 709 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02021 Mepo-Chr7 30438225 30448208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02021 98 812 B3 DNA Binding Superfamily AT5G37020 65.981 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo7g02021 AUX_IAA 4.6e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02021 - - gmx:100784804 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02021 7 30438225 30448208 Mepo7g02021 7 30438225 30448208 ECH
Mepo3g05300 3 66371802 66379618 Mepo7g02021 7 30438225 30448208 PCT