Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01991 ATGTACCAATCTTCATACCCGCATATGAACAACACAAATAATGATGGAAAATCAAAGGAGTGGACATGGGATGAAAATAAAATCTTTGAGACCATTCTCTTTGAATATCTTGAGGAAGTACAAGAAGGTCGATGGGAAAATCTTGCTCTTGTTTGCGGTCGATCATCAACTGAAGTAAAAGAACACTATGAGGCATTGTTGCATGACTTAGCACTCATTGAGGAAGGTCTTGTCGATTTTCCAACAGACACAGATGATTTTATTTCGAAAGGCAATGCTTCAATCGATGAGAAGAAAGATCCTCCAACTAAGAATAAGACTAAGAAAGTGGTGAAACATTGGAGTGAAGAAGAACACAGGTTATTTTTAGAGGGGATCGAGATTCATAAGAAGGGAAATTGGAAAATGATTTCACAACATGTTCGTACAAGAACTCCAAGTCAAGTTGCTAGCCATGCTCAGAAGCATTTCCTTCACCAAAATGCTACAACAAAAAAGACTTATAAAAAAAGAAGCAACTTCTACATTACCTCATTGAAGGGAGATTCCAAACCTCTTCTCAATAAGGACAACATTCCATCTCCTCCTACCTCATGGGATGGAAGTTTCCACCCTCTTCTCTATAAGGACAACTACGTTCCAGCTCTTCCTTCTGCTCATCTGAATTAA 669 0.3842 MYQSSYPHMNNTNNDGKSKEWTWDENKIFETILFEYLEEVQEGRWENLALVCGRSSTEVKEHYEALLHDLALIEEGLVDFPTDTDDFISKGNASIDEKKDPPTKNKTKKVVKHWSEEEHRLFLEGIEIHKKGNWKMISQHVRTRTPSQVASHAQKHFLHQNATTKKTYKKRSNFYITSLKGDSKPLLNKDNIPSPPTSWDGSFHPLLYKDNYVPALPSAHLN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01991 222 Gene3D - 12 80 - -
Mepo7g01991 222 CDD SANT 114 157 IPR001005 -
Mepo7g01991 222 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 160 IPR006447 GO:0003677
Mepo7g01991 222 ProSiteProfiles SANT domain profile. 114 161 IPR017884 -
Mepo7g01991 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 161 IPR017930 -
Mepo7g01991 222 ProSiteProfiles Myb-like domain profile. 114 157 IPR001005 -
Mepo7g01991 222 Gene3D - 113 161 - -
Mepo7g01991 222 SUPERFAMILY Homeodomain-like 108 161 IPR009057 -
Mepo7g01991 222 ProSiteProfiles Myb-like domain profile. 13 67 IPR001005 -
Mepo7g01991 222 Pfam Myb-like DNA-binding domain 113 156 IPR001005 -
Mepo7g01991 222 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 15 202 IPR043363 -
Mepo7g01991 222 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Mepo7g01991 222 CDD SANT 20 67 IPR001005 -
Mepo7g01991 222 SMART sant 17 69 IPR001005 -
Mepo7g01991 222 SMART sant 110 159 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01991 Mepo-Chr7 30138685 30140098 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo7g01991 Myb_DNA-binding 3.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01991 - - mtr:11436402 384.03