Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01979 ATGTCTTTGCAGAAGCTGAAGCTATCAACACCAAGTTCAATTTTTGAAGAAAACCCATCAATCAAAACAAAGAGAAAACCCAAAAGAAAGCTTGTTCGAATCATAATCACCGACCACGACGCCACTGATTCCGACTCCTCCGGCGACGAAGAGAGAGAGAAAAGGAACCAAACGACAAAACAAAGAAAACCCAAAAGAGAAATCCTTCATATTAACATGCACTGTCCCGTATCAAATTCTTCTCTCTCATTTTCTTCTCCTTCATCATCTTCTTCTCTTGCTTCGCCGGAGAAAACCCACAAAAAGTTCAATAGAGTGAGGAGACCCAAGAAACCACCAACCTCCGCCATCACGCGCCGCCACAGCAATTTCCGTGGGGTAAGACAACGACCGTGGGGAAAATGGGCTGCGGAAATCCGTGACCCGATCCGAAGAAAACGTCTCTGGCTGGGAACTTTTGCTACGGCGGAGGAAGCCGCCGCTGAGTACGACAGAGTGGCGGTGATGTTGCATGGTTCAAACGCCGTTACAAACTACCCAATAACTCCGGTGGAGGTTAAAACGGAGATTGAAAAGGATTTTGAAGTGACGCCGCCGGTGAGCAGCGGAAACAGCGACAGAGGTGGTTACTCCGACGCTTTGTCGTCGCCAACGTCTGTTTTACCTTACGACTGTGATTCGACGCCGTTTGACGGTTTCCGTTACGGCGACGTGGACGCTTTTGGGTTTCACATCGACGCGCCGTTAAGTTTACCAGAAGTTAACGTTCCGCTGACGTGTCATCAGAAGTTGGAAAAAGAAGAGAAGTTTGAAGAGTTTGATCTTGACGAGTTTATGACGTGGCCGTACTGA 852 0.4812 MSLQKLKLSTPSSIFEENPSIKTKRKPKRKLVRIIITDHDATDSDSSGDEEREKRNQTTKQRKPKREILHINMHCPVSNSSLSFSSPSSSSSLASPEKTHKKFNRVRRPKKPPTSAITRRHSNFRGVRQRPWGKWAAEIRDPIRRKRLWLGTFATAEEAAAEYDRVAVMLHGSNAVTNYPITPVEVKTEIEKDFEVTPPVSSGNSDRGGYSDALSSPTSVLPYDCDSTPFDGFRYGDVDAFGFHIDAPLSLPEVNVPLTCHQKLEKEEKFEEFDLDEFMTWPY 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01979 283 FunFam Ethylene-responsive transcription factor 2 122 181 - -
Mepo7g01979 283 SMART rav1_2 123 186 IPR001471 GO:0003700|GO:0006355
Mepo7g01979 283 MobiDBLite consensus disorder prediction 101 115 - -
Mepo7g01979 283 Pfam AP2 domain 123 172 IPR001471 GO:0003700|GO:0006355
Mepo7g01979 283 MobiDBLite consensus disorder prediction 33 70 - -
Mepo7g01979 283 MobiDBLite consensus disorder prediction 74 97 - -
Mepo7g01979 283 Gene3D AP2/ERF domain 123 182 IPR036955 GO:0003700|GO:0006355
Mepo7g01979 283 ProSiteProfiles AP2/ERF domain profile. 123 180 IPR001471 GO:0003700|GO:0006355
Mepo7g01979 283 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 29 220 - -
Mepo7g01979 283 PIRSF PTI6 1 283 IPR017392 GO:0003700
Mepo7g01979 283 MobiDBLite consensus disorder prediction 1 18 - -
Mepo7g01979 283 SUPERFAMILY DNA-binding domain 122 181 IPR016177 GO:0003677
Mepo7g01979 283 MobiDBLite consensus disorder prediction 1 124 - -
Mepo7g01979 283 PRINTS Ethylene responsive element binding protein signature 146 162 IPR001471 GO:0003700|GO:0006355
Mepo7g01979 283 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Mepo7g01979 283 CDD AP2 122 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01979 Mepo-Chr7 30018177 30020064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01979 22 223 AP2-EREBP Transcription Factor Family AT4G27950 43.564 1.68e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo7g01979 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01979 K13434 - gmx:100800489 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01979 7 30018177 30020064 Mepo7g01979 7 30018177 30020064 ECH
Mepo3g05244 3 65695170 65696961 Mepo7g01979 7 30018177 30020064 PCT