Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01970 ATGGGGGTTGAAGTGTGTATGAATAATTATTGTAAGGAAGGTTCAATTGGTGAATGGAAGAAAGGGTGGTCTTTGATCTCTGGTGGATTTGCAAAACTCTGCAACAAATGCGGACTTGCCTATGAGAATTCACTTTTCTGTGATAAATTCCACCGTCATGAAACTGGATGGAGGAAATGCAGCAATTGCAGCAAGCCTATCCACAGTGGTTGTATAGTATCAAAGTCTTCGTTTGAGTACCTTGATTTCGGTGGTATAAGTTGTGTTACCTGTGTTAAGCCCTCCGAGGTTCATCTGGATACTGAAAATCATAATAGGTTCCCTCAATCGACCAAAAACAATGCAAGTGATCGATATGGTGAACATATTGATGGTAGACTACTGGTGGAACAAGCTGGCAAAGGTAACCTTATGCAGTTGTGTAGAATTGGTGAAGTCGGTGAATCAAGCCGTTGGTCACAAGCTCAAAGAGATGGCATGGTTTCATGTATTGGTCCAAAGACCGAAGAAGTTAAGTGTCAATTCAACAAAGAGGATACAAGATTTTTGAATGTGATGAAACATTCTAGTCATTTAACGGCATTTACTACACTGGAAAATAATCGACCATCATGGGAGACTAAAAGTATAGATGAAACGCTTTCACTAAAGATGTCTCTAGGAACTTCATCAAGAAATTCTGTTCTGCCGTTGGCCACAGAGATTGGAGAAGTTAAACTTGAGGGTAAATCATCTTCTCATTTTCAACAAGGGCAAACATCTCAGTCTATATTGGCTCAACTATCGAAGACTGGAATTACCATGAATCTTGAAACAAATAAAGGCATGATCTCTCATCCACCACGCCGGCCACCTGCTGATATGAAGGGGAAAAATCAGTTACTTTCTCGATACTGGCCAAGGATTACTGATCAAGAGCTGGAGAAATTGTCGGGGGATTTGAAGTCTACTGTAGTGCCCTTATTTGAGAAAGTGTTAAGTCCGAGTGATGCAGGTCGAATTGGTCGTCTTGTGCTCCCAAAAGCGTGTGCTGAGGCTTTTCTTCCTCGTATTTTGCAATCAGAAGGTGTTCCTTTACAGTTCCAAGATATAATGGGGAATGAGTGGACTTTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCCTTGCAATTAAATGCTGGTGATACTGTAACATTTAGTCGGATAGATCCTGGGGAAAAATTTCTATTTGGTTTTAGAAGGTCATTGACTTCTATTGTTACACAGGATGCCTCTACATCTTCTCATTCTAACGGCATTTCGATAAAGGATACAAACTTTTCTGGTGCACCTCAGAATTTGAACTCATTAGGTAGTTTTTCTAATCTTCTTCAATCAATGAAAGGTAACGGGGAACCTTACTTAAATGGACATTCAGAACATCTGCGTTTGGGTAATGGAACTGCTGATTGGCTTAAAACTGCACATAGTGAGGAGGAAATGAACAATGGTCCATTGCTGCAACTGGTTTCAGTTTCAGAGAAGAAGAGGTCTCGCAATATTGGGACGAAAACTAAGAGGTTGCACATTCATAGTGAAGATGCTATGGAATTGAGACTTACGTGGGAAGAAGCACAAGAATTTCTTTGTCCGCCGCCTAGTGTCAAGCCAAATATTGTAACAATTGAGGACCAAGTATTTGAAGAATATGATGAACCCCCGGTTTTCGGAAAGATTAAAATCAATGACTCTCCATCAGGGTCTTCAGGTTCTGCATCAGAGCAGCTCGGTCCAAAGGAACGAGAAAGTCTTCAAAGAACCAAAAAAGATTCTAAAAAGAAGCGAAAAATTGCAGAGAAGAGCAAGTCAATTCAAGAACACAAGCTTTCAGGCCTAGATGCTCTTGCCAATGCAGCAGTTTTAGGCAATAATCTTGCTGACCCTGACGAGTCGTCGTCAGCTGGAGTCACCACAAAACATCCGAGGCATCGTCCTGGATGCACTTGTATCGTGTGCATTCAACCACCAAGTGGACAGGGAAAACATGACCCGACATGCACTTGCCTTGCCTGTGAGACTCTTAAGCGCCGGTTCAAGAGCCTTATGATGCGTAAGAAGAAAAATCAATTAGAATCTGAAGCAGTTGCTGACCAAAATAATCAAGTGAATCATAGAGATGAAGCAGGTACTAGTGGTGGTGTATCGAGGCAAGATACAAGTCACTCAACGGATGAGGGAAGCCTAAATGGAGGTCAGCTTGATGTTGTTGAGCCTAGTGCCGCGGGACAGTTGGATTTGAATTGTCATCCCAGTCATGAAGAAATGGAAACTGATACATATAACAGGCCAAAGCATGACTAG 2361 0.4176 MGVEVCMNNYCKEGSIGEWKKGWSLISGGFAKLCNKCGLAYENSLFCDKFHRHETGWRKCSNCSKPIHSGCIVSKSSFEYLDFGGISCVTCVKPSEVHLDTENHNRFPQSTKNNASDRYGEHIDGRLLVEQAGKGNLMQLCRIGEVGESSRWSQAQRDGMVSCIGPKTEEVKCQFNKEDTRFLNVMKHSSHLTAFTTLENNRPSWETKSIDETLSLKMSLGTSSRNSVLPLATEIGEVKLEGKSSSHFQQGQTSQSILAQLSKTGITMNLETNKGMISHPPRRPPADMKGKNQLLSRYWPRITDQELEKLSGDLKSTVVPLFEKVLSPSDAGRIGRLVLPKACAEAFLPRILQSEGVPLQFQDIMGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSLQLNAGDTVTFSRIDPGEKFLFGFRRSLTSIVTQDASTSSHSNGISIKDTNFSGAPQNLNSLGSFSNLLQSMKGNGEPYLNGHSEHLRLGNGTADWLKTAHSEEEMNNGPLLQLVSVSEKKRSRNIGTKTKRLHIHSEDAMELRLTWEEAQEFLCPPPSVKPNIVTIEDQVFEEYDEPPVFGKIKINDSPSGSSGSASEQLGPKERESLQRTKKDSKKKRKIAEKSKSIQEHKLSGLDALANAAVLGNNLADPDESSSAGVTTKHPRHRPGCTCIVCIQPPSGQGKHDPTCTCLACETLKRRFKSLMMRKKKNQLESEAVADQNNQVNHRDEAGTSGGVSRQDTSHSTDEGSLNGGQLDVVEPSAAGQLDLNCHPSHEEMETDTYNRPKHD 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01970 786 MobiDBLite consensus disorder prediction 713 749 - -
Mepo7g01970 786 SUPERFAMILY DNA-binding pseudobarrel domain 320 422 IPR015300 -
Mepo7g01970 786 MobiDBLite consensus disorder prediction 576 624 - -
Mepo7g01970 786 MobiDBLite consensus disorder prediction 709 786 - -
Mepo7g01970 786 Coils Coil 601 621 - -
Mepo7g01970 786 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 778 - -
Mepo7g01970 786 MobiDBLite consensus disorder prediction 582 598 - -
Mepo7g01970 786 CDD B3_DNA 320 421 IPR003340 GO:0003677
Mepo7g01970 786 Gene3D - 300 425 IPR015300 -
Mepo7g01970 786 MobiDBLite consensus disorder prediction 769 786 - -
Mepo7g01970 786 Pfam B3 DNA binding domain 322 421 IPR003340 GO:0003677
Mepo7g01970 786 ProSiteProfiles B3 DNA-binding domain profile. 322 422 IPR003340 GO:0003677
Mepo7g01970 786 SMART B3_2 322 422 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01970 Mepo-Chr7 29913544 29918927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01970 3 706 B3 DNA Binding Superfamily AT4G32010 41.019 1.60e-176 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo7g01970 B3 1.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01970 K09287 - psat:127118438 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01970 7 29913544 29918927 Mepo7g01970 7 29913544 29918927 ECH
Mepo3g05230 3 65480107 65488261 Mepo7g01970 7 29913544 29918927 PCT