Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01967 ATGGCAGGAAAGAAAGTGAAGCTTGCATTCATAACCAATAACACAGCAAGAAGGGCAACGTACAAAAAAAGGGTACAAAGTTTGATGAAGAAGCTCAATGAAATCACCACTCTATGTGGAGTCAAGGCATGTGGTATAGTTTTCAGGCCTGATGATCTTGAACCACAAATTTGGCCATCCATTCAAGGAGTCCATAGTGTGCTGGTTCGATTCATGCATACTCCGGACTTCGATCGAGATCGAAAGATGTTCAACCATGAGAGTTACTTGAAGGAAAGGATCCAAAAGTTGAATGAGAAGTTGAAGAAAAGAATGAAGGAGAATAGGATGATGTGGATGAGTGTTCAATTGCATCACTATCTTGAGGCTGGGAATGTTCCTGAGGATTTAAGCACTTGTGATAAGAATGATCTTACATATTTGGTTGATGAGAAAATGAAGGAAATTGATATGAAGATGGTGCAACTGGAGAAGGATGAGAGGGCTTAG 489 0.4029 MAGKKVKLAFITNNTARRATYKKRVQSLMKKLNEITTLCGVKACGIVFRPDDLEPQIWPSIQGVHSVLVRFMHTPDFDRDRKMFNHESYLKERIQKLNEKLKKRMKENRMMWMSVQLHHYLEAGNVPEDLSTCDKNDLTYLVDEKMKEIDMKMVQLEKDERA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01967 162 Coils Coil 91 111 - -
Mepo7g01967 162 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo7g01967 162 ProSiteProfiles MADS-box domain profile. 1 48 IPR002100 GO:0003677|GO:0046983
Mepo7g01967 162 CDD MADS_SRF_like 4 83 IPR033897 GO:0000981|GO:0000987|GO:0045944
Mepo7g01967 162 SUPERFAMILY SRF-like 4 95 IPR036879 GO:0003677|GO:0046983
Mepo7g01967 162 PANTHER MADS BOX PROTEIN 4 135 - -
Mepo7g01967 162 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 51 IPR002100 GO:0003677|GO:0046983
Mepo7g01967 162 FunFam Agamous-like MADS-box protein AGL80 13 98 - -
Mepo7g01967 162 Gene3D - 13 113 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01967 Mepo-Chr7 29898194 29898682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01967 1 153 Type I MADS-box Gene Family AT5G48670 39.216 5.42e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo7g01967 SRF-TF 6.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01967 - - tpra:123881962 226.868