Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01963 ATGGTGCCTTTGAGTCAGCCTAGTCTGTTGGATAAATCCTATGTCTCAGATCAAGCCACGTATCCAACTCTATTTTATAAAGCACTCTGCACACACAAAGGTGGAACCATTGTGCCATACCTTCGTCCTGTTAGTTCCCATCGGGCCTCCGCACGCTGTTTTCGTTCACTTCCACACGCCGTCAAACCTCAGCACACCGTGGAAGATCTCCTGGTCAATATAGTTACTGGTGCTGGAATTATGGCCTTGACTGCAAAGTCTTACATACCATTATGGCAAGGACACAGTGTCGACATATTTGAACAGCGAGTCTGTGGCGTTGGTAGGGTGACTCAGGTGGTGTGCAGTGACCGGTGCAAACATCAACGGATAGATCGAAGAAGAGCAAACAAAACTGCACATTCAATGGCATCTTCTACTTTGGTAGTTATCATGTTCTTTCTCTTCATTGAAAAACACTTTCATGGTGCCACTGCTAACTATGGAGGTTGGCAGAGTGGTCATGCCACTTTCTATGGTGGTGGTGATGCTGCTGCCACAATGGGAGGTGCATGTGGTTATGGAAATTTGTACAATCAAGGATATGGAACAAACACTGCAGCACTAAGCACAGCTTTGTTCAACAATGGTTTGAGCTGTGGGGCTTGTTATGAAATGAGGTGTGTTGGTGATCCAAGATGGTGCAAGCGTAGCACCATTGTTGTTACTGCCACAAACTTTTGCCCACCAAATTTTGCTTTGCCAAACAATAACGGAGGTTGGTGTAATCCTCCTCTGCAACACTTTGATATGGCACAACCAGCTTTCCTTCAAATTGCTCAATATAAAGCTGGAATTGTTCCTGTATCATTTAGAAGAGTGTCATGTATAAAGAAGGGAGGAATAAGGTTCACAATCAATGGCCACGCTTACTTCAACTTGGTTTTGATCACCAACGTCGCGGGTGCAGGAGATGCCCATGCAGTGTCAATAAAAGGGTCCAAAACTAGATGGCAACCCATGTCAAGAAATTGGGGCCAAAATTGGCAGAGCAATTCCTACCTTAATGGTCAAAGCCTCTCTTTTAAAGTAACCACTGGTGACGGTCGAACTGTGACTAGCTACAACGTGGCACCAGCTAATTGGCAGTTTGGTCAGACCTTTCAAGGGGACATCCACCGGAGACACCATCGCAGTCCCATAATCTCCGGAAAAACTGGAGCCTTTGTCACATTCTCCCTCTTTGTTGCAGCTGCAGAAAGCATCCCTTCATGGTTCCACGCTTTCAACCCCAGCAAAGGAAATGATCCTCAAAACAGCCTGCATCAATATTGA 1314 0.4574 MVPLSQPSLLDKSYVSDQATYPTLFYKALCTHKGGTIVPYLRPVSSHRASARCFRSLPHAVKPQHTVEDLLVNIVTGAGIMALTAKSYIPLWQGHSVDIFEQRVCGVGRVTQVVCSDRCKHQRIDRRRANKTAHSMASSTLVVIMFFLFIEKHFHGATANYGGWQSGHATFYGGGDAAATMGGACGYGNLYNQGYGTNTAALSTALFNNGLSCGACYEMRCVGDPRWCKRSTIVVTATNFCPPNFALPNNNGGWCNPPLQHFDMAQPAFLQIAQYKAGIVPVSFRRVSCIKKGGIRFTINGHAYFNLVLITNVAGAGDAHAVSIKGSKTRWQPMSRNWGQNWQSNSYLNGQSLSFKVTTGDGRTVTSYNVAPANWQFGQTFQGDIHRRHHRSPIISGKTGAFVTFSLFVAAAESIPSWFHAFNPSKGNDPQNSLHQY 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01963 437 PANTHER EXPANSIN-A15 141 383 IPR002963 GO:0009664
Mepo7g01963 437 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 304 383 IPR007117 -
Mepo7g01963 437 SMART dpbb_1 199 284 IPR007112 -
Mepo7g01963 437 PRINTS Expansin/Lol pI family signature 277 293 IPR007118 GO:0005576
Mepo7g01963 437 PRINTS Expansin/Lol pI family signature 181 199 IPR007118 GO:0005576
Mepo7g01963 437 PRINTS Expansin/Lol pI family signature 203 221 IPR007118 GO:0005576
Mepo7g01963 437 PRINTS Expansin/Lol pI family signature 369 383 IPR007118 GO:0005576
Mepo7g01963 437 PRINTS Expansin/Lol pI family signature 163 178 IPR007118 GO:0005576
Mepo7g01963 437 PRINTS Expansin/Lol pI family signature 331 345 IPR007118 GO:0005576
Mepo7g01963 437 Gene3D - 150 289 IPR036908 -
Mepo7g01963 437 FunFam Expansin 294 386 - -
Mepo7g01963 437 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 182 294 IPR007112 -
Mepo7g01963 437 SUPERFAMILY PHL pollen allergen 291 383 IPR036749 -
Mepo7g01963 437 CDD DPBB_EXPA_N 163 289 - -
Mepo7g01963 437 FunFam Expansin 153 290 - -
Mepo7g01963 437 Pfam Lytic transglycolase 199 284 IPR009009 -
Mepo7g01963 437 Pfam Expansin C-terminal domain 295 372 IPR007117 -
Mepo7g01963 437 Gene3D - 294 386 IPR036749 -
Mepo7g01963 437 SUPERFAMILY Barwin-like endoglucanases 146 312 IPR036908 -
Mepo7g01963 437 PRINTS Expansin signature 194 208 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 340 361 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 233 243 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 369 385 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 252 269 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 221 232 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 269 282 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 293 305 IPR002963 GO:0009664
Mepo7g01963 437 PRINTS Expansin signature 305 326 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01963 Mepo-Chr7 29865863 29870597 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01963 140 383 Expansin Gene Family AT2G40610 77.143 1.16e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01963 - - gmx:100816848 464.922