Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01961 ATGGCACAACCAGCTTTCCTTCAAATTGCTCAATATAAAGCTGGAATTGTGCCTGTATCATTTAGAAGAGTGTCATGTATAAAAAAGGGAGGAATAAGGTTCACAATCAATGGCCACTCTTACTTCAACTTGATTTTGATCACCAACGTCGCGGGTGCAGGAGATACCCATGCAGTGTCAATCAAAGGGTCCAAAACTAGATGGCAACCCATGTCAAGAAATTGGGGCCAAAATTGGCAGAGCAATTCCTACCTTAATGGTCAAAGCCTCTCTTTTAAAGTTACCACCGGTGACGGTAGAACCGTGACAAGCTACAACGTCGCACCAGCTAATTGGCAATTTGGTCAGACCTTTCAAGGGAGTCAGTTTTAA 372 0.4328 MAQPAFLQIAQYKAGIVPVSFRRVSCIKKGGIRFTINGHSYFNLILITNVAGAGDTHAVSIKGSKTRWQPMSRNWGQNWQSNSYLNGQSLSFKVTTGDGRTVTSYNVAPANWQFGQTFQGSQF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01961 123 PANTHER EXPANSIN-A15 1 123 IPR002963 GO:0009664
Mepo7g01961 123 SUPERFAMILY Barwin-like endoglucanases 1 30 IPR036908 -
Mepo7g01961 123 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 41 120 IPR007117 -
Mepo7g01961 123 SUPERFAMILY PHL pollen allergen 28 120 IPR036749 -
Mepo7g01961 123 Pfam Expansin C-terminal domain 32 109 IPR007117 -
Mepo7g01961 123 PRINTS Expansin signature 6 19 IPR002963 GO:0009664
Mepo7g01961 123 PRINTS Expansin signature 42 63 IPR002963 GO:0009664
Mepo7g01961 123 PRINTS Expansin signature 30 42 IPR002963 GO:0009664
Mepo7g01961 123 PRINTS Expansin signature 106 122 IPR002963 GO:0009664
Mepo7g01961 123 PRINTS Expansin signature 77 98 IPR002963 GO:0009664
Mepo7g01961 123 PRINTS Expansin/Lol pI family signature 68 82 IPR007118 GO:0005576
Mepo7g01961 123 PRINTS Expansin/Lol pI family signature 14 30 IPR007118 GO:0005576
Mepo7g01961 123 PRINTS Expansin/Lol pI family signature 106 120 IPR007118 GO:0005576
Mepo7g01961 123 FunFam Expansin 31 123 - -
Mepo7g01961 123 Gene3D - 29 123 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01961 Mepo-Chr7 29844623 29846072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01961 1 123 Expansin Gene Family AT2G40610 81.452 7.82e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01961 - - gmx:100815150 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01961 7 29844623 29846072 Mepo7g01961 7 29844623 29846072 ECH
Mepo3g05202 3 65059222 65061915 Mepo7g01961 7 29844623 29846072 ECH
Mepo3g05202 3 65059222 65061915 Mepo7g01961 7 29844623 29846072 PCT