Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01946 ATGTTTGGATGTCCAGAGACAAGCACAGAAAGATTAGATGAAATAGCAAAAATAAACTCAGAGGGAGAAACTTCTTCACAAATGGGAAGGAAGCATCTTTATGGTCCAACTCCTGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGTAAGCTATTGAGAAGAAGATGTGCTGAGGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAATTTGCAGCTGTTCATAAAGTTTTTGGTGCTAGCAATGTCTCTAAATTGCTATTGGAGGTACCTGAAGGACAAAGAGCAGATGCAGCAAATAGTATGGTTTATGAAGCTAATTTAAGGTTAAGAGATCCTGTTTATGGATGCATGGGTGCAATATCATCATTACAACAACAAGTCCAATCTTTACAAGCAGAACTACATGCAGTAAGAACTGAGCTACTAAAATACAAATATAGAGAAGCAGCTAGTTTCATTTCTTCTCAAGTATCAATGCCTACAAGTGCAAATTCACAAGGTCTTTCTCAACCTCTTCCTCTTCCTACGACTTTAGCTCCTCCGTCTCCAGCTCCTCCTCCACCACAAAAAGTATTGGCTTCTCAATCTATTATCCTTTCGTCGTTGTCTTCGTCTTCCACTTCGTCTGTTTACACTCCACCTAAAACAACAATGAGTCATGGATCTATTTCTAGTGAAAATATTCCATATTTTGTTTAG 717 0.3905 MFGCPETSTERLDEIAKINSEGETSSQMGRKHLYGPTPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKLLLEVPEGQRADAANSMVYEANLRLRDPVYGCMGAISSLQQQVQSLQAELHAVRTELLKYKYREAASFISSQVSMPTSANSQGLSQPLPLPTTLAPPSPAPPPPQKVLASQSIILSSLSSSSTSSVYTPPKTTMSHGSISSENIPYFV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01946 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 190 - -
Mepo7g01946 238 MobiDBLite consensus disorder prediction 209 232 - -
Mepo7g01946 238 MobiDBLite consensus disorder prediction 209 238 - -
Mepo7g01946 238 MobiDBLite consensus disorder prediction 169 196 - -
Mepo7g01946 238 Pfam Lateral organ boundaries (LOB) domain 47 144 IPR004883 -
Mepo7g01946 238 MobiDBLite consensus disorder prediction 19 38 - -
Mepo7g01946 238 MobiDBLite consensus disorder prediction 180 196 - -
Mepo7g01946 238 Coils Coil 126 146 - -
Mepo7g01946 238 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01946 Mepo-Chr7 29693880 29695137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01946 28 162 AS2 family AT2G30340 78.676 3.14e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo7g01946 LOB 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01946 - - ccaj:109795340 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01946 7 29693880 29695137 Mepo7g01946 7 29693880 29695137 ECH