Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01918 ATGACTCGTAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCGCATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAACATAACCATGATGTCCCGGCTGCTCGTGGAAGTGGAAGTCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGCTGCAGCCATGGCCGTAAGGCCTCTTCAGATTCAGAGGCCACAACAAGCACCTCAAGGACAACCACCATTCAACCTTCAAATGCTGCAGGGTCAAGGAAACTATGGATTCTCAAGGTTTGATAATCAAATGGCGCCTTACATGAATCAACAACAGCAGCAGCAACAACAACAAATGGCTGAAAATGGTTTTGCCTCTAGAGCTAAGGAAGAACCTAAAGATGAAATGTTCCTTGAATCTTTGCTTTGCTGA 450 0.4511 MTRRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNAAAMAVRPLQIQRPQQAPQGQPPFNLQMLQGQGNYGFSRFDNQMAPYMNQQQQQQQQQMAENGFASRAKEEPKDEMFLESLLC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01918 149 SMART WRKY_cls 1 42 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo7g01918 149 MobiDBLite consensus disorder prediction 80 129 - -
Mepo7g01918 149 MobiDBLite consensus disorder prediction 34 67 - -
Mepo7g01918 149 ProSiteProfiles WRKY domain profile. 1 43 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo7g01918 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 107 IPR044810 GO:0003700
Mepo7g01918 149 MobiDBLite consensus disorder prediction 80 149 - -
Mepo7g01918 149 MobiDBLite consensus disorder prediction 52 67 - -
Mepo7g01918 149 Gene3D WRKY domain 1 44 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo7g01918 149 SUPERFAMILY WRKY DNA-binding domain 3 43 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo7g01918 149 Pfam WRKY DNA -binding domain 2 41 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01918 Mepo-Chr7 29379181 29379630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01918 4 43 WRKY Transcription Factor Family AT2G38470 57.143 4.05e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo7g01918 WRKY 1.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01918 K13424 - gmx:100127385 192.971