LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g01869	ATGTCCAAAGTAGTTTGCGTCACCGGCGGAAGCGGATGCATCGGTTCATGGCTCGTTCATCTCCTTCTCCACCGTGGCTACACCGTTCACGCCACCGTCCAAAATCTCAACGATGACAACGAGACAAAGCATCTACAAGTTCTTGAAGGAGCTCAAACTAATCTCCGTCTCTTCCAAATCGACCTTCTCAACTACGACACCGTCCTCGCTGCTGTTCACGGTTGCGATGGAGTTTTCCATCTCGCTTCGCCTTGCATTGTAGATAAAGTTCTTGACCCTCAGAAGGAGCTTTTGGATCCTGCAATTAAAGGGACTTTGAATGTGCTTACTGCTGCGAAGGAAGTAGGGGTGAAGCGAGTGGTTGTTACTTCTTCTATCTCTTCCATTATACCTAGTCCTAACTGGCCTTCTGATGTTGTAAAGAGAGAGGATTGTTGGACTGATGTTGAGTATTGCAAGAAAAAGGAGTTGTGGTATCCAATGTCCAAGACATTGGCTGAGAAAGCTGCTTGGGATTTTTCCAAAGAAAACGGTTTGGATGTTGTTGTGGTGAATCCTGGTACTGTGATGGGCCCTGTTATTCCACCAAGGATTAATGCAAGCATGCTCATGCTTGTGCGACTTCTTCAAGGCTGCACTGAAACATATGAAGACTTTTTTATGGGATTAGTCCACTTCAAAGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAGGAAGCAACTGGCAGACATGTCTGTGTTGAGGCTATCACTCACTACGGTGATTTTGCGGCAAAAGTTGCTGAACTTTATCCAGATTATAATGTGCCTAAAATACAACGAGATACGCAACCTGGACTGTTGAGAGCAAAGGATGGATCAAAGAAACTCGTGGATTTGGGTTTGGAATTCATTCCAATGGAGCAAATTATAAGGGATGCTGTAGAAAGCTTGAAGAGCAAAGGATTCATTTCATGA	963	0.4434	MSKVVCVTGGSGCIGSWLVHLLLHRGYTVHATVQNLNDDNETKHLQVLEGAQTNLRLFQIDLLNYDTVLAAVHGCDGVFHLASPCIVDKVLDPQKELLDPAIKGTLNVLTAAKEVGVKRVVVTSSISSIIPSPNWPSDVVKREDCWTDVEYCKKKELWYPMSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRINASMLMLVRLLQGCTETYEDFFMGLVHFKDVALAHILVYENKEATGRHVCVEAITHYGDFAAKVAELYPDYNVPKIQRDTQPGLLRAKDGSKKLVDLGLEFIPMEQIIRDAVESLKSKGFIS	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g01869	320	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	3	310	-	-
	Mepo7g01869	320	Pfam	NAD dependent epimerase/dehydratase family	5	246	IPR001509	-
	Mepo7g01869	320	CDD	FR_SDR_e	5	297	-	-
	Mepo7g01869	320	FunFam	Cinnamoyl-CoA reductase 1	1	320	-	-
	Mepo7g01869	320	Gene3D	-	1	320	-	-
	Mepo7g01869	320	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1	313	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g01869	Mepo-Chr7	28538418	28541986	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g01869	3	320	Monolignol Biosynthesis Gene Families	AT5G58490	76.101	0.0	521

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g01869	-		-	gmx:100803241	553.132