Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01851 ATGTCCTCCGACAACTACATCATGCTTGCAGCAATCATTTCTCTCCTCCTAGTTATCATCTTTGTCCTCCTTCTACACCTCTACGCCAAATGGTTCCTAGCTCAGTCCAATCCTCGCGGTCCGGTGAACCTCTCCGACGTTCCAATATCTCCCAACTTCCACCACCATTTCAACATCCAATCCCCACCCTTTAAAGGACTCAACTCAACAACACTTTTAACCATTCCCACATTTGTGTCGGAAGAAAAAACAGAAGAACTAGAATGTGTGATTTGTTTGAGTTATATAGAAGAAGGAGAGATAGGAAGAAAGTTACCAAAATGTGGACATGCTTTTCATGTTGAATGTATTGATATGTGGTTGAATTCACATTGCAATTGTCCCATTTGTAGAGCTTTGATTGTTGAGGAAGATTCTCATGGTGGTAATGTTGTTGAGATTGTGATTGATACTCCAAGTTATAGTGAGAGTGGCTCTATTTCTGTCTCAGAAACTAGTTCTTTGTCTTCGTTTGGATTTTCTTTCAAGAGAATTCTAAGCAAAGTTTTTCTTTCTTCACATGTAAATGAATTAGATGATGGTTCACAATGA 591 0.3909 MSSDNYIMLAAIISLLLVIIFVLLLHLYAKWFLAQSNPRGPVNLSDVPISPNFHHHFNIQSPPFKGLNSTTLLTIPTFVSEEKTEELECVICLSYIEEGEIGRKLPKCGHAFHVECIDMWLNSHCNCPICRALIVEEDSHGGNVVEIVIDTPSYSESGSISVSETSSLSSFGFSFKRILSKVFLSSHVNELDDGSQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01851 196 CDD RING-H2_EL5-like 88 131 - -
Mepo7g01851 196 SMART ring_2 89 130 IPR001841 -
Mepo7g01851 196 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 11 141 - -
Mepo7g01851 196 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Mepo7g01851 196 Pfam Ring finger domain 88 131 IPR001841 -
Mepo7g01851 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 136 IPR013083 -
Mepo7g01851 196 SUPERFAMILY RING/U-box 78 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01851 Mepo-Chr7 28217770 28218360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01851 7 149 Rapid Response to Elicitors AT3G16720 36.943 5.25e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01851 - - psat:127118511 255.758