Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01848 ATGCCTATGGAGCTGGAGGGATATATCTGCCTTGGGTGTACAATCCTCACAATTTCTATTGCAATGCCGAATATTATGTGGATAAATGTAAGGGTTCAACTTGATGTTGTTTACATTATAGTTCTAGACCCAGTACCATATCTTAACTGGTCGTTGACATTACGTAAAGTGAATGCTTTCTTATTTTCTACTTGCTCTTATTTGGAGACAGATTTGCCCTATTTTACTGGCGAGACTGCTTTGCAAAAGAAATTTTCAAATTTTGGCCAGATAGCTGAATTCGAAATGGTTAAAGATGTAGTCACAGAAAGATCAAAGGGACTTGCTATTATTCAATACACATGTCAAGACGATTCCATGCTTGCACTTGAAACAATGGATCAACAGAGTTTTTATGGTCGTACAATCTCTGTAGAACTTGCAAAACTTGATTTGCGTAATTTTGTTGGACCTCCAAAGGCCTCAGGGCCTCCAAAGAAGTGGAATTTGCCAGCAGAGCAAGTAGAAGAGGAAGCAGTTCGTAGGGCCTCCGAAGCACGGAAGTTCATACCAGTATTCATGGGTAGTGCTTTCAATAAGGGACCACACCTACTTCTGGATGGTGTACTTACTTATTTACCATGTCTGGTTGAAGCTACTAAGTATGCTCCTGACCAAACAAAGGATATTGACGAAATAAGTGTAGCCTATTGGGCTGCAGAATCTGAAAATATAAAATCTTACTTAGGTGACATAAGTCCTAATGAGCTAGTATGGCTGAAAATTAAGAAGTTAGAGGAACCGTTTGAAATCTATGGAAAGGGGGACCGCGAGAATGAACTTGATAAAGCTTCGAAGGATATGATTCTGGTTGACACAAGGGACCTGCTTGTGACAGCAAAGCTTTGGAGGTTGGCACAAAAACATTCTTCAATACTGACAATAGCTGGTGCAAAACATTTGATTGGAATGCGCCATTATTGGGCCATGATGGTACAACATTCATAA 987 0.3992 MPMELEGYICLGCTILTISIAMPNIMWINVRVQLDVVYIIVLDPVPYLNWSLTLRKVNAFLFSTCSYLETDLPYFTGETALQKKFSNFGQIAEFEMVKDVVTERSKGLAIIQYTCQDDSMLALETMDQQSFYGRTISVELAKLDLRNFVGPPKASGPPKKWNLPAEQVEEEAVRRASEARKFIPVFMGSAFNKGPHLLLDGVLTYLPCLVEATKYAPDQTKDIDEISVAYWAAESENIKSYLGDISPNELVWLKIKKLEEPFEIYGKGDRENELDKASKDMILVDTRDLLVTAKLWRLAQKHSSILTIAGAKHLIGMRHYWAMMVQHS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01848 328 Gene3D - 70 145 IPR012677 -
Mepo7g01848 328 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 71 171 - -
Mepo7g01848 328 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 143 IPR000504 GO:0003723
Mepo7g01848 328 SMART rrm1_1 70 139 IPR000504 GO:0003723
Mepo7g01848 328 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 136 IPR000504 GO:0003723
Mepo7g01848 328 SUPERFAMILY RNA-binding domain, RBD 71 142 IPR035979 GO:0003676
Mepo7g01848 328 Gene3D - 166 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01848 Mepo-Chr7 28201218 28209460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01848 1 49 SBP-box Gene Family AT5G18830 53.061 2.97e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01848 - - gmx:100305971 142.895