Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01821 ATGGAGACAAAGATGTTGGGGTTGGGTTCATTATTCCCTTGCTACACACCACCAAACCGTTCTCGTCTTAACCTTCTCAGACCATCATTATCTATGCGACACGAATATCCCCTTGCTAGCAAAATCCTTGTTAAAAATCTACCCTATTTTACTGGCGAGACTGCTTTGCAAAAGAAATTTTCAAATTTTGGCAAGATAGCTGAAGTCGAAATGGTTAAAGATGTAGTCACAGAAAGATCAAAGGGACTTGCTTTTATTCAATACACATGTCAAGACGATGCCATGCTCGCACTTGAAACAATGGATCAACAGAGTTTTTATGGTCGTACGATCTCTGTAGAACTTGCAAAATTTGATTTGCGTAATTTCGTTGGACCTCCAAAGGCCTCAGGGCCTCCAAAGAAGTGGAATTTGCCAGCAGAGCAAGTAGAAGAGGTAGATTGCTGGTACTGA 453 0.4128 METKMLGLGSLFPCYTPPNRSRLNLLRPSLSMRHEYPLASKILVKNLPYFTGETALQKKFSNFGKIAEVEMVKDVVTERSKGLAFIQYTCQDDAMLALETMDQQSFYGRTISVELAKFDLRNFVGPPKASGPPKKWNLPAEQVEEVDCWY 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01821 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Mepo7g01821 150 SMART rrm1_1 41 114 IPR000504 GO:0003723
Mepo7g01821 150 SUPERFAMILY RNA-binding domain, RBD 29 124 IPR035979 GO:0003676
Mepo7g01821 150 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 31 118 - -
Mepo7g01821 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 111 IPR000504 GO:0003723
Mepo7g01821 150 Gene3D - 29 120 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01821 Mepo-Chr7 27887722 27890485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01821 22 117 Eukaryotic Initiation Factors Gene Family AT2G36660 31.000 1.76e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01821 - - gmx:100305971 189.119