Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01809 ATGTGCGGTGATTCTAAGAAAAAAAATTGTCAAAAGGATTTCATCATGGGGTGTGAGCATGTGAATGGGAATAAAGAAGGGCAGTATCATGAGGTTTCTTATTTGCTTGAATTTTCAGCTGCAGATGATGTGATTGGTTTCAAAAATGCGATTGAAAACGAGGGTTGTGATGTTGATGGGGTTGGTTTGTGGTATGGAAGGAACGTTGGTTCGAACAAATTAGGTTATGAAGAGAGGACACCTCTCATGGTTGCTGCTATGTATGGAAGCTTGGGTGTATCGGCTTATATTCTTGGAACAGGTCGGGTTGATGTTAATCGGTCTAGTGGATCCGATGGTGCTACTGCTCTTCATTGTGCGGTTGTTGGGGGTTCTGCTGCTTCCCCCGAGATTATCAAGATTTTGCTTGATGCATCGGCGGATGCTAGTGCTGTTGATGCCAACGGTAACCGACCCGTTGATTTGATTGTTTCGCTGGCCAATTCTATCTTCAATCCAAGGAAGAGGATACTACAAGCTCTTTTGGAGGGTACAGGCGGTGCTGATCAGACACGTCTTCTGTTTCCGGAGACAATTGATGACATTGACGAATATCAAAGGCAAGATGTAAACACGCCTCGTGTTTCAAAAGATTATCTTGTTGATGTCTCTCTTCCAGACATTAAGAATGGGATATATAGTACCGATGAGTTTAGGATGTATACATTCAAAGTGAAGCCTTGTTCAAGGGCATATTCTCATGACTGGACCGAGTGTCCCTTTGTTCATCCAGGGGAAAATGCAAGGCGACGCGATCCAAGGAAATATCATTATAGCTGTGTCCCTTGTCCTGAATTTCGGAAAGGATCATGCAGTAAAGGAGATTCTTGTGACTATGCACACGGTATTTTTGAGTGCTGGCTTCATCCTGCGCAGTATAAGACACGGCTTTGCAAGGATGAAGGTTCATGCATGAGAAGAGTTTGCTTCTTTGCTCACAAGGTCGAGGAGCTTCGCCCCTTGTATGCTTCTACCGGTTCCGCTATTCCATCTCCTAGGTCATATTATAGTACTGCTTCTACATTAGAGATGGGTTCAATTAGCCCAATGTCACTTGGTTCTTCATCTGTTTTGGTACCGCCCTCCTCAACGCCACCTTTGACTTCATCTGGAGCGTTGTCTCCCGTTGCTGCTGCAGCCATGTGGCAGACACCGTCTAATGTTTCGATCCCTACCCTTCAGCTTCCCAAAAGCAGGTTGAACACTGGAATGACCGCTAGAGATATTAATTCAGATATTGCAATGCTTAGGGTTGAAACTCAGCGGCGAAAGCAGCAATTACTGATGGATGAGATGTCCGGTCTTTCCTCTCCTTCCAACTGGAATCATTCCATGCCTAACAGTCCATCTTTTCCGGTTTCTTTGACCAACCATTCTACCGGGGAACTAAATAGGTTTTCGGGGGTGAATCCTACAAACCTTGAAGACATTTTCGGGTCTCTTGATCCATCAATCTTGCATAAATTCCACAGAATTTCACTTGATGCTGCAGGAGCAGCAGGATCTCAGTTACAATCTCCAACTGGAATCCAAATGCGTCCAAATATGAACCAGCATCTGCAACAAAACTATTCTTCAGGCCATTCCACTTCCAGTGTGATTGGATCGCCGACTTATAGGTTTGAGTCATCCGGGGAGTTATCCGCGTCGGCTTTGAATGCAAGAGCTGCTGCATTTTCAAAGCGGAGCCAGAGCTTTATCGAGCGCGGTGTCACAAACCGTCATTCTGAGCTTCATTCTCCTGCTAAGCCTTATGCTTTTTCTAACTGGGGCTCACCTGATGGAAATTTGGATTGGACTTCACAAGGAGAAGAACTGAATAAGCTGAGGAAATCATCTTCTTTTGGATTTCGAACCAGCAGTACTCCTTTAACTCCAGCTGCAGCTAGGGAACAGGAAAATGACTATGAACCAGATGTGTCTTGGGTTAATTCACTTGTAAAGGATGCTACACCGCAAGAATCTCATCAGTTTAGTGTTGAGGATCAGAAAAGGAAACTGCAGCGCCATCTTAACAATGGAACAGATTCAATTCCGGCTTGGTTGGAGCAATTGTACATGGATCAGGAGCAAATAGTGCAGTGA 2124 0.4477 MCGDSKKKNCQKDFIMGCEHVNGNKEGQYHEVSYLLEFSAADDVIGFKNAIENEGCDVDGVGLWYGRNVGSNKLGYEERTPLMVAAMYGSLGVSAYILGTGRVDVNRSSGSDGATALHCAVVGGSAASPEIIKILLDASADASAVDANGNRPVDLIVSLANSIFNPRKRILQALLEGTGGADQTRLLFPETIDDIDEYQRQDVNTPRVSKDYLVDVSLPDIKNGIYSTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDSCDYAHGIFECWLHPAQYKTRLCKDEGSCMRRVCFFAHKVEELRPLYASTGSAIPSPRSYYSTASTLEMGSISPMSLGSSSVLVPPSSTPPLTSSGALSPVAAAAMWQTPSNVSIPTLQLPKSRLNTGMTARDINSDIAMLRVETQRRKQQLLMDEMSGLSSPSNWNHSMPNSPSFPVSLTNHSTGELNRFSGVNPTNLEDIFGSLDPSILHKFHRISLDAAGAAGSQLQSPTGIQMRPNMNQHLQQNYSSGHSTSSVIGSPTYRFESSGELSASALNARAAAFSKRSQSFIERGVTNRHSELHSPAKPYAFSNWGSPDGNLDWTSQGEELNKLRKSSSFGFRTSSTPLTPAAAREQENDYEPDVSWVNSLVKDATPQESHQFSVEDQKRKLQRHLNNGTDSIPAWLEQLYMDQEQIVQ 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01809 707 SUPERFAMILY Ankyrin repeat 57 157 IPR036770 -
Mepo7g01809 707 Gene3D - 270 333 - -
Mepo7g01809 707 ProSiteProfiles Ankyrin repeat profile. 112 147 IPR002110 GO:0005515
Mepo7g01809 707 MobiDBLite consensus disorder prediction 623 641 - -
Mepo7g01809 707 ProSiteProfiles Ankyrin repeat region circular profile. 112 146 - -
Mepo7g01809 707 PANTHER UNKEMPT FAMILY MEMBER 37 662 IPR045234 -
Mepo7g01809 707 Pfam Ankyrin repeats (3 copies) 66 143 IPR002110 GO:0005515
Mepo7g01809 707 ProSiteProfiles Zinc finger C3H1-type profile. 275 297 IPR000571 GO:0046872
Mepo7g01809 707 SMART c3hfinal6 270 296 IPR000571 GO:0046872
Mepo7g01809 707 SMART c3hfinal6 305 328 IPR000571 GO:0046872
Mepo7g01809 707 SMART ANK_2a 77 107 IPR002110 GO:0005515
Mepo7g01809 707 SMART ANK_2a 112 144 IPR002110 GO:0005515
Mepo7g01809 707 FunFam Zinc finger CCCH domain-containing protein 66 228 296 - -
Mepo7g01809 707 MobiDBLite consensus disorder prediction 623 647 - -
Mepo7g01809 707 Gene3D - 22 176 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01809 Mepo-Chr7 27736205 27739358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01809 1 702 C2H2 Transcription Factor Family AT5G12850 37.405 5.54e-137 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo7g01809 Ank_2 9.8e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01809 - - aprc:113846970 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01809 7 27736205 27739358 Mepo7g01809 7 27736205 27739358 ECH