Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01791 ATGCATCCTCGCCGGCGAAAGTGTGTCCGGACATCAGCGCCAGAGAAGGAATCAAACCATTTTATGAAAGCCATACTTCCCTCACCCATTCATTCCAAACAAATAAGAATTCCAGATGAATTTATAACAAGATTTGGGAATGAACTCAAGAATGCTGCTACAATTACTGTTCCAGATGGGAATTCAAAGTTTAGTGCTATTATATTTGATGCAACTTCTGTTGAAATTTGCTATCCTTTCAAAACTCCAAGTACTAATGGAGAACCAAACACAGATTATGCTAGTTCTAGAAAAAGGTCCAAGGTTGAAACATGTGAGAGTCGTGGGAAAAAGTATGTTAATTTTGATTTTGCTACAAAGTATTTGAAGCCAAATATTCCTATAAAGCTCCAAAATTCTCATGGAGAGCAGTGGGAAGTGTTTGGCATATTTCATGATGTCAGATCATCAGCAATGCAAATAGTGAGGGGATTTTCTATATTTCAAAGGGACAACAACCTGTCACATGGAGATTATTGTGTGTTTGAGCTGATCAAGAGGAAGCCGGTTGTGCTAAAAGTCACAATGTTTCGTGCAGTTGACTATTGTGATTAA 594 0.3788 MHPRRRKCVRTSAPEKESNHFMKAILPSPIHSKQIRIPDEFITRFGNELKNAATITVPDGNSKFSAIIFDATSVEICYPFKTPSTNGEPNTDYASSRKRSKVETCESRGKKYVNFDFATKYLKPNIPIKLQNSHGEQWEVFGIFHDVRSSAMQIVRGFSIFQRDNNLSHGDYCVFELIKRKPVVLKVTMFRAVDYCD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01791 197 SUPERFAMILY DNA-binding pseudobarrel domain 109 190 IPR015300 -
Mepo7g01791 197 Gene3D - 90 196 IPR015300 -
Mepo7g01791 197 PANTHER B3 DOMAIN-CONTAINING 59 181 - -
Mepo7g01791 197 Pfam B3 DNA binding domain 108 192 IPR003340 GO:0003677
Mepo7g01791 197 CDD B3_DNA 107 191 IPR003340 GO:0003677
Mepo7g01791 197 ProSiteProfiles B3 DNA-binding domain profile. 128 193 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01791 Mepo-Chr7 27539404 27541381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01791 112 196 REM Transcription Factor Family AT1G49480 38.372 1.00e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo7g01791 B3 6.1e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01791 - - mtr:120575755 323.168