Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01772 ATGATTCACTACCCTAACCATCAACAAAACAATGCAAGTATGTTCCCCTACTCTTATGGTTCCAGCCATGAGTTTATGTGGCCAAATTATACTCAAGAATCAAGCTTCGTTGTTGATGGGGTCTTAGCAAATGAAGAGGCTTTGAAGTGGACTAACTTCAACCAAACCCCCACATTAGGATACGGTGAAAACACCAACATTGTGGGAAGGAAAACTAAGAAAGAGACATCCGAGGTCTTGATCAAAGGACAATGGACAAATGAAGAAGACAGGAAATTGATAAGGTTGGTGAAGCAATATGGTGAAAGAAAATGGGCTCAAATAGCTGAGAAGTTAGAAGGAAGGATTGGCAAACAGTGTAGAGAGCGATGGCATAATCATTTGCGTCCTGATATTAAGAAATATAGTTGGAGTGAAGAAGAAGAGAAGATATTAGTAGCTACACATGCCAAAATTGGAAACCGTTGGGCTGAGATGGCAAAGAAGATTCCAGGAAGAACTGAAAATGCCATAAAAAATCATTGGAATGCCACTAAAAGGAGACAAAATTCAAGAAGAAAGAACAAGAAGAATGAAACTAATTCCAAGGGATCAAAACCTAAGTCCTACATACTTGAAAACTATATCAAAACCAACACTTCCATCACTACAAAAATTACCAACATACCCTCTTCCTCTCATGCAACACTTTCCTTAAACCTTGAAGAAAATCAATCAAATCCTTTGTTCAATGAATTACCATCTGAATCTTTTTCCAATGAACTACACTTCATACAACAAATTTTGATGGATGATAATAATCAGAATGTTGTTGATGATGTGAATGAGAGTGAGCTTGTTCATTCAATTCAATACCCAAATTACAACATGCACTTGGATACTCCTACCTCTATGAATAATTTCCTTCCTTATGATCTTTACCTCTCTCAGTTGTTGAATATGTAG 945 0.3683 MIHYPNHQQNNASMFPYSYGSSHEFMWPNYTQESSFVVDGVLANEEALKWTNFNQTPTLGYGENTNIVGRKTKKETSEVLIKGQWTNEEDRKLIRLVKQYGERKWAQIAEKLEGRIGKQCRERWHNHLRPDIKKYSWSEEEEKILVATHAKIGNRWAEMAKKIPGRTENAIKNHWNATKRRQNSRRKNKKNETNSKGSKPKSYILENYIKTNTSITTKITNIPSSSHATLSLNLEENQSNPLFNELPSESFSNELHFIQQILMDDNNQNVVDDVNESELVHSIQYPNYNMHLDTPTSMNNFLPYDLYLSQLLNM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01772 314 ProSiteProfiles Myb-like domain profile. 77 128 IPR001005 -
Mepo7g01772 314 FunFam Transcriptional activator Myb isoform A 81 134 - -
Mepo7g01772 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 183 IPR017930 -
Mepo7g01772 314 SUPERFAMILY Homeodomain-like 81 175 IPR009057 -
Mepo7g01772 314 MobiDBLite consensus disorder prediction 167 202 - -
Mepo7g01772 314 SMART sant 133 181 IPR001005 -
Mepo7g01772 314 SMART sant 81 130 IPR001005 -
Mepo7g01772 314 Gene3D - 81 134 - -
Mepo7g01772 314 Pfam Myb-like DNA-binding domain 85 142 - -
Mepo7g01772 314 PANTHER MYB PROTEIN-RELATED 73 201 - -
Mepo7g01772 314 CDD SANT 136 179 IPR001005 -
Mepo7g01772 314 ProSiteProfiles Myb-like domain profile. 129 179 IPR001005 -
Mepo7g01772 314 Gene3D - 135 204 - -
Mepo7g01772 314 CDD SANT 85 128 IPR001005 -
Mepo7g01772 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 132 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01772 Mepo-Chr7 27299081 27301161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01772 72 313 MYB Transcription Factor Family AT5G58850 47.232 1.03e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g01772 Myb_DNA-bind_6 5.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01772 K09422 - aprc:113874412 303.908