Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01738 ATGGGAGAGGGAGAGAGAATGGTGGAACCGCAACAAGAACCAGAACCAGTAACAACAACAACATCATCATCAACAACAACAACAACATTAACAACAACAACAACAACAACATGGAAGCAAAACCAAACAATCCAAACATTATCAGAAAAACTAACAAATGGAAACCTTAACACAAAAATCGAAGCTGCAAGAGAAATTCGAAGAATGGTTCGAAAATCATCAAAGACACGCTCCAAAATTGCTGATGCTGGTGTTATTCAACCACTCATCTTCATGCTCTCTTCTTCCAACACTGATGCTCGTCAATCTTCTCTTCTTGCTCTTCTCAACCTTGCTGTTCGCAATGAACGAAACAAGGTCCAGATAGTGACAGCTGGTGCAGTGCCTCCTCTGGTGGAGCTCCTCAAGATACAAACTAACGGTATACGAGAATTGGCTACAGCCGCAATCTTGACACTCTCATCTGCTGCACCCAACAAGCCTATTATTGCTGCTTCTGGAGCTGCTCCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAACCCTCCATAATCTCTCCTCTAGCACCGAGAATCCCATTGAACTTCTTGATGCTAGCGCTGTTTCCCCTCTTATCAACCTCCTTAAAGACTGTAAGAAGTATTCAAATTTTGCAGAAAAAGCTACATCACTACTCGAAATCCTTTCCAACTCTGAAGAGGGACGGATCGCAATCTCACTTACAGAAGGTGGAATTTTAACCCTAGTAGAAACAGTTGAAGATGGATCACTTATCAGCACAGAACATGCTGTTGGAGCGTTGCTATCATTATGTCAAAGCTACCGGGATAAATATCGGGAACTAATCCTTAAAGAAGGAGCGATTCCGGGTCTGTTACGGCTGACAGTAGAGGGCACAGTTGAAGCACAAGATAGAGCTCGCATGCTTCTGGATTTACTCAGAGATTCTCCTGAAGAAAAAAGACTAGACTCCTCGGTTTTGGAGAAAATTGTATACGACATGGCTGAAAGGCTAGATAGAGTATCGGTAGATAAAGCTGCTGAAACTTCCAAATGA 1083 0.4266 MGEGERMVEPQQEPEPVTTTTSSSTTTTTLTTTTTTTWKQNQTIQTLSEKLTNGNLNTKIEAAREIRRMVRKSSKTRSKIADAGVIQPLIFMLSSSNTDARQSSLLALLNLAVRNERNKVQIVTAGAVPPLVELLKIQTNGIRELATAAILTLSSAAPNKPIIAASGAAPLLVQILKSGSVQGKVDAVTTLHNLSSSTENPIELLDASAVSPLINLLKDCKKYSNFAEKATSLLEILSNSEEGRIAISLTEGGILTLVETVEDGSLISTEHAVGALLSLCQSYRDKYRELILKEGAIPGLLRLTVEGTVEAQDRARMLLDLLRDSPEEKRLDSSVLEKIVYDMAERLDRVSVDKAAETSK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01738 360 MobiDBLite consensus disorder prediction 13 33 - -
Mepo7g01738 360 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 167 209 IPR000225 GO:0005515
Mepo7g01738 360 SUPERFAMILY ARM repeat 38 328 IPR016024 -
Mepo7g01738 360 PANTHER U BOX DOMAIN-CONTAINING 31 323 - -
Mepo7g01738 360 MobiDBLite consensus disorder prediction 1 33 - -
Mepo7g01738 360 FunFam U-box domain-containing protein 4 24 360 - -
Mepo7g01738 360 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 208 252 IPR000225 GO:0005515
Mepo7g01738 360 SMART arm_5 240 281 IPR000225 GO:0005515
Mepo7g01738 360 SMART arm_5 197 239 IPR000225 GO:0005515
Mepo7g01738 360 SMART arm_5 73 113 IPR000225 GO:0005515
Mepo7g01738 360 SMART arm_5 114 155 IPR000225 GO:0005515
Mepo7g01738 360 SMART arm_5 156 196 IPR000225 GO:0005515
Mepo7g01738 360 Pfam Armadillo/beta-catenin-like repeat 115 154 IPR000225 GO:0005515
Mepo7g01738 360 Pfam Armadillo/beta-catenin-like repeat 158 196 IPR000225 GO:0005515
Mepo7g01738 360 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 126 168 IPR000225 GO:0005515
Mepo7g01738 360 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 84 126 IPR000225 GO:0005515
Mepo7g01738 360 Gene3D - 24 357 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01738 Mepo-Chr7 26952528 26959120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01738 31 324 U-box Gene Family AT3G54790 38.514 1.99e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01738 K08332 - gmx:100782472 473.781