Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01700 ATGGAAACTTTAGGTGGTAATTCATCATCATCATCACCATCATTATCATCAGCGTCATCATCATCGTCTTTTGGAGGGGTTAACACTGATGATAACAATGGTAGTGTATCTTGGTATGGAATGAGGTTACCTGTTAACCCCTTTTTGTCACCAATTTCGTTTTTGTTGGATTATTCTGGAATTTTGCGTTCGAATAATGATTCTGAGGGTATGATTGTCAACAACGGAGTTTCTGGTTCGGAGTTACGATCTCAGGTTGATGCTGGTGGTGCTGTTGCTGGGAGTAGTGCAGGGGAAGTTGCAATAAGGATTATTGGAGCTGGAGAGAATATTCATAATCAGGTTGAGGAAGTGGGTTATGATGATTGTGGCGAGGAGCTTATTGGTGAGAGAAGTGGAATGCCTGGATTGGGTGAGAATGATGCCGAGGGTCGTGGTGGAATTGAGGCTAGTGAAGGGGTTCCTCTTGTGTCTTCATCTTCTTCGTCGTCGTTGGCTGGTAGTGGACAGGTTGATGGTGAGGCTGCTGGGAATGGAACAGAAAATAACAGGGATTCGTCTTCTTATCAGAGATATGATATTCAGCTGGTTGCCAAGTGGATCGAGCAGATTCTTCCTTTCTCGCTTTTGTTGTTGGTTGTTTTCATTCGACAGCATTTACAAGGTTTCTTTGTCACAATTTGGATAGCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTGAAGGGAGATAGGAAAGTCTCTTTGCTTGCTGGTATCGCTTTTGCTTTCATTCTTCATGTGATATGCATTTACTGGTGGTATCGAAATGATGATATTTTATATCCACTGGCCATGTTACCTCCTAACCCAACACCTTTCTGGCATGCAATATTCACGATCTTGGTCAATGATATATTGATGCGGCAAGTTGCAATGGCTTTTAAGTGTATCCTTCTTATATATTACAAAAAGGGGAAAGGTCATAACTTCCGTCGGCAGGCTCAAATGTTGACTCTTGTTGAGTACACGCTGCTGTTGTATCGTGCCTTGTTGCCAACACCAGTCTGGTACCGGTTTTTCTTGAATAGGGAATATGGAAGTCTCTTTTCGTCACTGACCACAGGGTTGTATTTAACTTTCAAGCTAACATCTGTGGTTGAGAAGGTCCAATGCTTTATTTCTGCCTTGAAAGCATTATCAAGAAAGGAAATTCATTACGGGGTCTATGCCACAGCAGAACAGGTTACTGCTGCCGGTGACCTATGTGCTATATGCCAAGAGAAGATGCATTCCCCTATCTTGTTGCGCTGTAAACACATTTTCTGCGAAGATTGTGTATCTGAATGGTTTGAGAGAGAAAGGACTTGCCCCCTATGCAGAGCATTGGTTAAAGCAGCTGATCTTCGCACCTTTGGAGATGGATCAACAAGTTTGTTCTTCCAGTTGTTTTAA 1449 0.4244 METLGGNSSSSSPSLSSASSSSSFGGVNTDDNNGSVSWYGMRLPVNPFLSPISFLLDYSGILRSNNDSEGMIVNNGVSGSELRSQVDAGGAVAGSSAGEVAIRIIGAGENIHNQVEEVGYDDCGEELIGERSGMPGLGENDAEGRGGIEASEGVPLVSSSSSSSLAGSGQVDGEAAGNGTENNRDSSSYQRYDIQLVAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNEIVKKQTALKGDRKVSLLAGIAFAFILHVICIYWWYRNDDILYPLAMLPPNPTPFWHAIFTILVNDILMRQVAMAFKCILLIYYKKGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNREYGSLFSSLTTGLYLTFKLTSVVEKVQCFISALKALSRKEIHYGVYATAEQVTAAGDLCAICQEKMHSPILLRCKHIFCEDCVSEWFERERTCPLCRALVKAADLRTFGDGSTSLFFQLF 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01700 482 MobiDBLite consensus disorder prediction 1 26 - -
Mepo7g01700 482 ProSiteProfiles Zinc finger RING-type profile. 421 459 IPR001841 -
Mepo7g01700 482 SUPERFAMILY RING/U-box 413 463 - -
Mepo7g01700 482 CDD RING-HC_RNFT1-like 419 459 - -
Mepo7g01700 482 MobiDBLite consensus disorder prediction 154 186 - -
Mepo7g01700 482 ProSitePatterns Zinc finger RING-type signature. 436 445 IPR017907 -
Mepo7g01700 482 Pfam Zinc finger, C3HC4 type (RING finger) 419 463 - -
Mepo7g01700 482 SMART ring_2 421 458 IPR001841 -
Mepo7g01700 482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 398 469 IPR013083 -
Mepo7g01700 482 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 19 482 IPR044235 GO:0061630|GO:1904294
Mepo7g01700 482 MobiDBLite consensus disorder prediction 130 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01700 Mepo-Chr7 26518009 26526477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01700 26 482 C3H Transcription Factor Family AT5G01960 59.657 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01700 - K22379 gmx:100784614 582.793