Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01685 ATGTCTCTAGGTCAAACTGAAGGAGATAGTTCTTCAAGCAACTTCAAAATTAGGGACCTACCAGCTATGTACCCAGAGCTATTTGAAGATGATCCAATCTTCAAATATCTACGTGAGACTACAAAAAAGGCTGAAAGAGAACGTCTTCGTCACATGCGTAAGACAGTTGAAACTACTAAGATTCCAGTTGGTCAGATTGTTGAACAACAAGTAACAATCAATGGAAATGTTGAGCTACGACGAATTTATGTTCCTGATCCTAAAGTGAGAGAAACGATGGAGTATATGGTCCAAATTGCTTGGGAACGTCAAAGCTCCAATCAACCTTTAAGGTCGCAGGATCGGATGGCAATAGACTACTATAATGTTGTGTTACGCCATCTTCCACAACCGATTAATGGTCCAAACCAACCTGTGTTACCCCATCTTCAACAATCAAATTATCATGCACAAAATGAGGAAAATTTTGCTGCCGGCAAAGAAATTGAAAGACTGGACTGTGCACATAGATTCCACATGAGTTGCATTAAAGACTGGCTCCTAGCTGTAAAGAATGTATGCCCACTTTGCAATAAAAGGGGATATCATTTCAATTAA 597 0.3953 MSLGQTEGDSSSSNFKIRDLPAMYPELFEDDPIFKYLRETTKKAERERLRHMRKTVETTKIPVGQIVEQQVTINGNVELRRIYVPDPKVRETMEYMVQIAWERQSSNQPLRSQDRMAIDYYNVVLRHLPQPINGPNQPVLPHLQQSNYHAQNEENFAAGKEIERLDCAHRFHMSCIKDWLLAVKNVCPLCNKRGYHFN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01685 198 ProSiteProfiles Zinc finger RING-type profile. 165 191 IPR001841 -
Mepo7g01685 198 CDD RING-H2 154 191 - -
Mepo7g01685 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 195 IPR013083 -
Mepo7g01685 198 Pfam RING-H2 zinc finger domain 162 191 IPR024766 GO:0008270
Mepo7g01685 198 SUPERFAMILY RING/U-box 156 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01685 Mepo-Chr7 26347124 26348948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01685 160 193 C3H Transcription Factor Family AT5G67120 52.941 4.67e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01685 - - cam:105851629 93.5893