Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01683 ATGGGTAGGCGAAAAAGTAAACCTCATCGATCAGGTGGGATAATAGTAGAAACAAATGCTAGTGCTGAAACAGAATTGAATGAACATGCTGTAGAAGCCGGAGGAAAAGAAAATAATGATTTTGGTGATATTTATAAACCTTATTTTGTTGAGGTTGACCGGTCTAGTTGGTTGTCCAATGAACACCTTGATATTTCTGAAGTGGTTCTTAGGGATTTAAATATAGGAGAAGGCTTTTATGGATTTGAATTGTCTGAGGATATTTATCAGGATCCCCAATTCTCGTTAAGATTTCGGTTGTGCAATATTGGCAATGATCTTGGTCGAACCAAACTTGGCCATTGGCCAGTGTTACCTTATACTGATATTCATCTAGAGTTTGTTAAAAGAGCTACGGTTGACAGTACCGAAACATGCACGGTGTTATTATCAGGTATTTTTGATGGACCTGATGAAAGTGTTTCTGGTCTTGTTCATTTGGCGAGTATGAAATTTGTTACATTGAGGGCAATTCTTGGGATTAGGCTTTCGGAGGACATTCTTTCCCTTAGGGTGAGGGTTGAGGTACTAAAGAGTGCCTTCGATGCATGCAAGTCACTTCTTGAGGCTTCTAGAAAACTATGGAAAAAGAGTATGATGAATGTTATGTCTTGGTTACGACCAGAAATAATGACTTCAGATGTTAAGTATGGGTTTAGTAGCTATATGGAAATGGAAGTTGATTTGCAGACAGACATGGCAGATGACGGTGGCTATGCAGGGAAATGTTCGAGGTTCGATCCTGCTGGTTTTTATGAAGCCATCAAACCTTCAAAAACAGAGCCAATGCTTGAAGATGACATACCAGAGTTACTTCCTGAACTGAGGCCATATCAACGGCGTGCAGCTTTGTGGATGGTAAAACGAGAAAAAGCAATGGAAGATCAGGCTGAAATAGAAAGAAATCAGTTTCATTCTCCATTATGTGTGCCAGTGGATTTTCTGGACACAAGGTCTAAAATGTTTTTCAACCCTTTCAGTGGAAATATTTCCTTGCGTCCAGAGACTTCGTCACCTTATGTATTTGGAGGCATTCTTGCTGATGAGATGGGAATGGGAAAAACTGTAGAATTGCTTGCTCTCATCTTTGCTCACCGGAGATCAGCATATGAAAGTGACATACTAATGGATTCAGTGCCCCAAGTCAACGGCGAAGAAAAAGTCACTTTAAAAAGACTCAAAAGAGAGCGTGTGGAGTGCATATGTGGAGCTGTGAGCGAAAGTCTCAAATATGAAGGACTATGGGTTCAGTGTGACATTTGTGATGCTTGGCAACATGGAGATTGTGTTGGTTATTCAACTAAAGGAAAATCACTGAAATCAAAACAAGGATTGGAAAGCAAGACATATAAAACCACCATAGCTGTGACGAATGGGGAATATGTATGTCAGATGTGCTCTGAACTAATACAAGCTACTGAATCACCTATTGCTTCTGGTGCCACTCTCATTGTCTGCCCAGCTTCTATTTTGCCCCAGTGGCATGACGAAATTATACGTCATACACGCCCAGGAGCCTTGAAAACTTGTATTTATGAAGGTGTGCGTGACACATCTTTCACCAATTCATCTCTGATGGATATCGGTGATCTTGCCAGTGCGGACATTGTATTAACTACATATGATGTGCTTAAAGATGATTTGTTCCATGATTCTGATAGACATATAGGCGATCGACACCTTTTGAGATTTCAGAAAAGGTACCCAGTTATCCCAACTCTTCTTACCAGAATATACTGGTGGAGGATTTGTTTGGATGAGGCTCAAATGGTGGAGAGTACTGTTGCTACCGCTGCTACTGAAATGGCTCTAAGACTCCATTGCAAGCATCGTTGGTGCATTACAGGGACCCCGATTCAGCGAAAGTTTGATGACTTATATGGACTTTTAAGGTTCACCAAAACCAGTCCTTTCAATATATACAGATGGTGGAGTGAAGTTATTCGAGATCCTTATGAGAAGGGAGATATGGGAGCTACGGAATTTACACACAGAGTTTTCAAACAAATCATGTGGCGTTCTTCTAAACAACATGTTGCAGATGAATTGGAATTGCCCTCCCAAGAGGAGTGCCTCTCTTGGCTTACACTATCACCAGTAGAAGAGCACTTTTACCAGAGGCAGCATAAAGCTTGTGTTATAGACTCCCATGAAGTTATTGAAAGTTTGAGAAATGATATTCTTAATAGAAAAGTCCCAGATTCTGTTTCTTCGAGTGGTTCCTCCGATCCATTAATCACTCAAGCGGAGGCAGGGAAGCTATTGAATGCTTTGCTAAAGCTTCGCCAGGCTTGTTGTCACCCCCAGGTTGGAAGTTCTGGATTGCGTTCCCTGCAGCAGTCACCTATGACAATGGAGGAAGTACTAACGGTCCTTATAAGCAAGACCAAGATAGAAGGTGAGGAAGCTCTCAGGAGGTTAGTTATTGCTCTGAATGCGCTTGCAGCAATAGTTACAATACAAAACGATTTTTCTCAAGCTGCTTCGCTGTACAATGAATCTCTTACTTTAGCTGAAGAGCATTCTGAAGATTTCCGTCTGGATCCATTGTTAAATATCCACATTCATCACAATCTTGCCGAAATATTCCCCCTGGCTGAAAATTTTGCTTTGAATTTGCCATCCAAAGGAAAACAATTCTCTGGGACTTCCGCAGTTAATACAACCAAAAAGCATTATATTGTAAAGGTTGATCATGATCAAGTGAAGAGGCATAAAATCAGTAACTGCGGTGACATAAGTTTAACTGTGGCTGCTTCAGATCCATCAAATGTTGCATCTAGTAGTTCAGAAAATGGATTAAATGATAGGGAATCTGATGATTTGTCGGCCAGTTCTGTCAAATATCTGAAAGCACAATGTGAAGATTCAAAACATAAATACTTATCTGTGTTCAGTTCAAAGCTAGTTGCAGCTCAGCAGGAGTTTCAAAGCTCTTACATGCAGGTTTGTAATGCTTATCACGACACCAGTACAAATCAAAATACATTATGGTGGTTAGAAGCACTTCACCATGCTGAGAAGGATAAGGATTTCTCAACTGAGTTGATTAGAAAGATTGAAGAATCCATCTCAGGAAATTCAAACAATTCAAAATCGTCAAGATTAGCTGCTCGTTTTCGGAGCATAAGCTCTCTGACGTATGAAATTCAAACCGGATTGGATCAGTTAGTAGCCTCAAGGAAAGTGGTATTAGATCGTCTGTTAGAAATTGATCAGACGATGGAAAACCCAAAAGATGAAGATATTGAGCGCGTTGGTAAATGTCGAAATTGTCAACCTAATTGTGATGGCCCCCCATGCGTTCTGTGTGAACTAGATGAATTGTTTCAGCACTACGAAGCTAGACTCTTTGTTCTCAAGAACGAACGTGGAGATATAATTTCCTCTGCTGAGGAGGCAGTAGATTTTCAAAAGAAAAGTTTCGCACGGAATCATTTCCTCTCAAACCTATCACAATCTAATCAAAGTTCATCAGTATCTAATATTGATAATGAAGAATCCAGAAAAAGGAATGTTGGGCAGAAAGTTGTGACTTCAAGATCGGCATCTATCCTGGAGGTTCTTCTTGGAGTTATAAAGAACTATTGCAAGACTCGGTTTGGAAAGGACAGTGCCTCAGCAGCGACCAAGCATTTACATATTCTTGAGGGAATGCGAAAGGAATTTGTCTATGCAAGATCTTTGGCATCAGCTCAAGCTCAATATCTGCGTGCTCATGATGAAATAAAGATGGCGGTTTCTCGTTTACACCTAAGGGAAAATGAAGACGATAAATCTCTTGATGCTTTAGGTGAAAATGAATTATATGCGGCTAGCTCAAACTTTTCCCAGGAGAAGTTTATGTCATTGGCCTTGTTGTCACAGATAAAAGGAAAGTTACGCTACTTAAAGGGTTTGGTTCAATCTAAGCAAAAACTGCCATCGGAAAGTCCAGATAACTCTTCATGCACTCAAGATACAAATGCTATGTCAAACTCTACGGAAGAGAAGGGTGAACTCATACCAAAAACTTATGAGGAATCATGCCCAATTTGTCAAGAAAAGCTAGGCCATCAGAGAATGGTGTTTCAATGTGGGCATGTTACTTGCTGTAAATGTTTATTTGCTATGACTGAGAAAAGACTTAAACGTAGCAAGACTCATACTTGGGTGATGTGCCCTACATGTCGACAGCATACTGATTTTGGAAACATTGCCTATGCTGTTGATGCACAAAAGGAATCTCCCAATTCGTCAATGCTGCATACAATTGACAATTGTGAAAAACACGAAGCATCCATTACTGTTGAAGGCTCATATGGAACCAAGGAATCTCCCAATTCGTCAATGCTGCATAAAATTGACAACTGTGAAAAACACGAAGCATCCATTACTGTTGAAGGCTCATATGGAACCAAGATTGAAGCAGTCACAAGAAGAATCTTGTGGATAAAGGCTACAAATCATAACTCAAAAGTTCTTGTATTTTCAAGTTGGAATGATGTACTTGATGTATTGGAACATGCCTTTGCCACCAACAACATCACCTTTGTCCGGATGAAGGGAGGCAGGAAAGCACACACTGCCATAAGTCAATTTAGAGGAATACAGAATGGCACAAAAGGATGTGAGGGGGAAGAGCCAAAATCTATTCAGGTGTTATTGCTTTTAATCCAACATGGAGCCAATGGCCTCAATCTTTTGGAAGCACAGCATGTGGTTCTTGTAGAGCCATTACTCAATCCAGCTGCTGAAGCACAAGCAATCAGCCGTGTACATCGGATTGGCCAAAAACAGAAGACCCTCATTCACCGTTTCTTAGTAAAAGACACAGTTGAAGAGAGCATATATAAATTGAACAGAAGCAGAAGCAATCATTTATTCATTAGTGGCAACACAAAAAATCAAGATCAACCTGTTTTGACCCTAAAGGATGTGGAATCCTTGTTGGCAAGAGCACCAATAACTGCGCCGGAAATCGATGAAAATCCTTATAATACAAATACAAACCTGAGAGACCTGCCACCATCACTTGCAGCGGCAATAGCGGCCGAGAGAAGACATAATGAGCATAGAACATGA 5103 0.4049 MGRRKSKPHRSGGIIVETNASAETELNEHAVEAGGKENNDFGDIYKPYFVEVDRSSWLSNEHLDISEVVLRDLNIGEGFYGFELSEDIYQDPQFSLRFRLCNIGNDLGRTKLGHWPVLPYTDIHLEFVKRATVDSTETCTVLLSGIFDGPDESVSGLVHLASMKFVTLRAILGIRLSEDILSLRVRVEVLKSAFDACKSLLEASRKLWKKSMMNVMSWLRPEIMTSDVKYGFSSYMEMEVDLQTDMADDGGYAGKCSRFDPAGFYEAIKPSKTEPMLEDDIPELLPELRPYQRRAALWMVKREKAMEDQAEIERNQFHSPLCVPVDFLDTRSKMFFNPFSGNISLRPETSSPYVFGGILADEMGMGKTVELLALIFAHRRSAYESDILMDSVPQVNGEEKVTLKRLKRERVECICGAVSESLKYEGLWVQCDICDAWQHGDCVGYSTKGKSLKSKQGLESKTYKTTIAVTNGEYVCQMCSELIQATESPIASGATLIVCPASILPQWHDEIIRHTRPGALKTCIYEGVRDTSFTNSSLMDIGDLASADIVLTTYDVLKDDLFHDSDRHIGDRHLLRFQKRYPVIPTLLTRIYWWRICLDEAQMVESTVATAATEMALRLHCKHRWCITGTPIQRKFDDLYGLLRFTKTSPFNIYRWWSEVIRDPYEKGDMGATEFTHRVFKQIMWRSSKQHVADELELPSQEECLSWLTLSPVEEHFYQRQHKACVIDSHEVIESLRNDILNRKVPDSVSSSGSSDPLITQAEAGKLLNALLKLRQACCHPQVGSSGLRSLQQSPMTMEEVLTVLISKTKIEGEEALRRLVIALNALAAIVTIQNDFSQAASLYNESLTLAEEHSEDFRLDPLLNIHIHHNLAEIFPLAENFALNLPSKGKQFSGTSAVNTTKKHYIVKVDHDQVKRHKISNCGDISLTVAASDPSNVASSSSENGLNDRESDDLSASSVKYLKAQCEDSKHKYLSVFSSKLVAAQQEFQSSYMQVCNAYHDTSTNQNTLWWLEALHHAEKDKDFSTELIRKIEESISGNSNNSKSSRLAARFRSISSLTYEIQTGLDQLVASRKVVLDRLLEIDQTMENPKDEDIERVGKCRNCQPNCDGPPCVLCELDELFQHYEARLFVLKNERGDIISSAEEAVDFQKKSFARNHFLSNLSQSNQSSSVSNIDNEESRKRNVGQKVVTSRSASILEVLLGVIKNYCKTRFGKDSASAATKHLHILEGMRKEFVYARSLASAQAQYLRAHDEIKMAVSRLHLRENEDDKSLDALGENELYAASSNFSQEKFMSLALLSQIKGKLRYLKGLVQSKQKLPSESPDNSSCTQDTNAMSNSTEEKGELIPKTYEESCPICQEKLGHQRMVFQCGHVTCCKCLFAMTEKRLKRSKTHTWVMCPTCRQHTDFGNIAYAVDAQKESPNSSMLHTIDNCEKHEASITVEGSYGTKESPNSSMLHKIDNCEKHEASITVEGSYGTKIEAVTRRILWIKATNHNSKVLVFSSWNDVLDVLEHAFATNNITFVRMKGGRKAHTAISQFRGIQNGTKGCEGEEPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKQKTLIHRFLVKDTVEESIYKLNRSRSNHLFISGNTKNQDQPVLTLKDVESLLARAPITAPEIDENPYNTNTNLRDLPPSLAAAIAAERRHNEHRT 1700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01683 1700 CDD DEXQc_SHPRH 288 687 - -
Mepo7g01683 1700 ProSitePatterns Zinc finger PHD-type signature. 413 479 IPR019786 -
Mepo7g01683 1700 SMART PHD_3 412 480 IPR001965 -
Mepo7g01683 1700 SUPERFAMILY RING/U-box 1351 1408 - -
Mepo7g01683 1700 SMART helicmild6 1511 1603 IPR001650 -
Mepo7g01683 1700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 681 IPR027417 -
Mepo7g01683 1700 SMART ring_2 1356 1403 IPR001841 -
Mepo7g01683 1700 Gene3D - 1427 1680 IPR027417 -
Mepo7g01683 1700 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 409 452 IPR013083 -
Mepo7g01683 1700 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER 5 1698 - -
Mepo7g01683 1700 SMART ultradead3 284 656 IPR014001 -
Mepo7g01683 1700 ProSiteProfiles Zinc finger RING-type profile. 1356 1404 IPR001841 -
Mepo7g01683 1700 MobiDBLite consensus disorder prediction 1318 1346 - -
Mepo7g01683 1700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 592 1652 IPR027417 -
Mepo7g01683 1700 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1483 1654 IPR001650 -
Mepo7g01683 1700 Pfam Helicase conserved C-terminal domain 1482 1603 IPR001650 -
Mepo7g01683 1700 CDD PHD_TCF19_like 414 479 - -
Mepo7g01683 1700 Pfam SNF2-related domain 291 783 IPR000330 GO:0005524|GO:0140658
Mepo7g01683 1700 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1342 1425 IPR013083 -
Mepo7g01683 1700 Gene3D - 453 688 IPR038718 -
Mepo7g01683 1700 Pfam PHD-finger 413 481 IPR019787 -
Mepo7g01683 1700 CDD SF2_C_SNF 1477 1614 - -
Mepo7g01683 1700 MobiDBLite consensus disorder prediction 1318 1345 - -
Mepo7g01683 1700 SUPERFAMILY FYVE/PHD zinc finger 409 481 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01683 Mepo-Chr7 26321155 26337325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01683 284 781 RAD5 or RAD16-like Gene Family AT5G22750 26.627 3.19e-38 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo7g01683 SNF2_N 1.3e-84 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01683 K15710 - gmx:100776659 2620.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01683 7 26321155 26337325 Mepo7g01683 7 26321155 26337325 ECH