Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01666 ATGTCTCTACCAAGGTTAGGAATAGGTGATGAGGAAAGTAAAAGCAATGTTACTTTGTTGGAAAAAAGTGTGTGTTTGAATGGTTCAAAACCAAAAGAGTTCAACTACATGGGATTATCATCCTCTAATTGTTCATCAGTGGATAGTTCAGTTTCAAAAATTCAATCTTTTAAAGATGAGACCAAAAGTAATATGAATCTTAAAGCTACTGAGCTTAGATTGGGACTTCCAGGATCAGTTTCTCCTGAAAGAGATTCATCAGATTTTTGTTTGAGAAGTTCGAAGCAGTTTGATGAAAAGCCTCTTTTTCCTTTGCACCCTCAAAAAGATGATCATCTTTTTGAATCAAAGCCTGCTGTTTTAGGTAACAAAAGAGGGTTTTCTGATGCCATGAATGTTTTTTCAGAGGGGAAATTGAAACCTAGCTCCAAAATGCTTGAGAATGTTGCCGGGCAGAAAGTGAAAGCCGATGAAATAGCAACAGTTAAGATTGGTCTTGAGAGGCCTAATGGTGTCGGTGAAAGCAAACCAAGTCTTAATGGTTCTGCAAATAATGGAAATAGCACTGCTCCTGCTAGCAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCGTTTAGGAAAAATTCATTGACAACTGCTTCAAAGAACACTGAAGAGGTTGATGGAAAATTGGGATCAGGAGGTACTGTGTTTGTGAAGGTCAGCATGGATGGTGCTCCTTATTTGAGAAAAGTAGACTTGAATAATTACACTGCATATTCACAACTATCTTCTTCTCTTGAGAAGATGTTCAGCTGTTTCACCATAGGTCAATGTGAATCTCATGGAAATCAGATGCTGAATGAAACCAAGCTGAGGGATCTGCTTCATGGTTCAGAATATGTTATTACTTATGAGGATAAAGATGGTGATTGGATGCTTGTCGGTGATGTTCCCTGGGAGATGTTTATTGATACATGCAGGAGGCTAAGAATCATGAAGAGCTCTGATGCCATTGGTTTAGCCCCCAGAGCAGTTGAAAAAAGTAAAAGCAGGAACTAA 1044 0.3889 MSLPRLGIGDEESKSNVTLLEKSVCLNGSKPKEFNYMGLSSSNCSSVDSSVSKIQSFKDETKSNMNLKATELRLGLPGSVSPERDSSDFCLRSSKQFDEKPLFPLHPQKDDHLFESKPAVLGNKRGFSDAMNVFSEGKLKPSSKMLENVAGQKVKADEIATVKIGLERPNGVGESKPSLNGSANNGNSTAPASKAQVVGWPPIRSFRKNSLTTASKNTEEVDGKLGSGGTVFVKVSMDGAPYLRKVDLNNYTAYSQLSSSLEKMFSCFTIGQCESHGNQMLNETKLRDLLHGSEYVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01666 347 Gene3D - 226 341 - -
Mepo7g01666 347 ProSiteProfiles PB1 domain profile. 230 329 IPR000270 GO:0005515
Mepo7g01666 347 Pfam AUX/IAA family 70 338 IPR033389 -
Mepo7g01666 347 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 334 IPR003311 GO:0005634|GO:0006355
Mepo7g01666 347 SUPERFAMILY CAD & PB1 domains 226 328 - -
Mepo7g01666 347 MobiDBLite consensus disorder prediction 175 194 - -
Mepo7g01666 347 MobiDBLite consensus disorder prediction 168 195 - -
Mepo7g01666 347 FunFam Auxin-responsive protein 226 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01666 Mepo-Chr7 26104783 26108668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01666 214 337 B3 DNA Binding Superfamily AT4G23980 29.839 1.25e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mepo7g01666 AUX_IAA 8.6e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01666 K14484 - gmx:100815447 474.552