Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01650 ATGTCCTCACAAGCAGTGCAATTGCGTATCAAGAGTAATCATGTGGTTATGGACAATGGTATACTACAAGTGTATTTATCCAATCCTGGTGGATTTGTAACTAGAATACAATATAATGGCATTGATAATCTGCTTGAAGCTCTTAACGAAAAGAATAATAGAGGGTATTGGGATGTCGTTTGGAGTGAAACAGGAAGTACGGGAACAACCGGGACATTCGAGCGGGTTGTGGGAACAAGTTTTAGTGTGATAATGGAAACAGAAGAACAAGTTGAAATCTCGTTTACAAGAACATGGAATCCATCTCTAACGGGAAAGTTGTCACCTCTTAATATAGACAAAAGGTATGTGATGCTACGTAATTCCTCAGGATTCTATTCATATGGTATCTTTGAACACCTAAAGGAGTGGCCAGCTTTCAACATACCTCAAATCAGGATTGTTTATAAGCTTCGTAAAGACAAGTTTCATTACATGGCTGTGGCTGATAATAGACAAAGGTTGATGCCTCTTCCTGATGATCGATTACCAGGAAGAGGAAAAGAACTTGTTCCCCCAGAAGCTGTTTTGCTTGTAAATCCCATCGAGCCAGAATTTTTAGGAGAGGTTGATGACAAGTATCAATACTCAAGTGAGAACATAGACCTTAAGGTTCATGGATGGATAAGTACAGAGTCTGAAACAAATCCAGCAACAGGTTTTTGGGTAATCATACCTAGCAATGAGTTTCGATCAGGTGGTTTTGTTAAACAGAATCTTACCTCACATGTTGGCCCCATCAGCCTTGCAATGTTTCTTAGTGCTCATTACGCAGGAGAGGATATAGTTCTTAAACTCCAGCCTAATGAGCCATGGAAAAAAGTTTTTGGGCCAACTTTTGTCTATCTTAACAACTTGTTGGATCATGAGGACCCACTAGCTCACCTCTGGGAGGACGCCAAATTTCAGATGAACAAGGAAGTACAAAGTTGGCCCTATGATTTTCCAGCTTCAGATAATTTTCAAAAGACCAGCCAACGAGGTAGCGTTTGTGGCACGTTACTAGTTCGTGACAGGTGTGTAAGTGACAAGGACATAATAGCACAAGGTGCATATGTAGGATTAGCCCCACCAGGAGATGCTGGATCTTGGCAAAGGGAATGCAAGGGATACCAATTTTGGAGTAGAGCAAACGAGGAAGGCTACTTTTCAATCAATAATATACAGAGTGGTGATTACAATCTATATGCATGGATTCCAGGTTTCATTGGAGAATATTGGAACAATGTTGTCCTCAAAATAACCTCAGGTTGTGAAATAAATGTTGGTGACATAGTCTTTGAGCCTCCAAGAGATGGTCCAACATTATGGGAGATTGGAATTCCTGATCGCTCTGCTGCTGAGTTCTATGTTCCAGATCCTAACCCAAAATTCATAAACAAGCTTTTTATAGACCATCCAGACAAGTTTAGGCAGTATGGCTTGTGGGAAAGATATGCAGAGCTATACCCAAATGAAGATTTGATTTATAATGTTGGTGTTAGTGACTACACAAAAGATTGGTTCTATGCACAGGTCACCAGGAAGAAAAATGATGGCAGTTACCAAGGAACTGCATGGCAAATTAAGTTCAACATGGATGATGTGCAACAAAATGGACTGTATAAATTAAGATTAGCTCTTGCAAGTGCAAATGTCTCTGAGTTACAGGTTAGAGTGAATGATGTAAAACAAGATCCTCCACTATTTACTACGGGGGTGATTGGTAAGGACAATGCAATAGCTAGACATGGAATTCATGGACTCTATTGGCTATTCAACATTGGTGTGCCAAGTATTTTGCTATCCAAAGGAGATAATACTATTTTTCTAACACAAACTATGGCTACTGGTCCCTTGGCCCTCTTTCAGGGAATAATGTATGATTATATTCGTTTAGAAAGCCCCAATTAA 1932 0.3986 MSSQAVQLRIKSNHVVMDNGILQVYLSNPGGFVTRIQYNGIDNLLEALNEKNNRGYWDVVWSETGSTGTTGTFERVVGTSFSVIMETEEQVEISFTRTWNPSLTGKLSPLNIDKRYVMLRNSSGFYSYGIFEHLKEWPAFNIPQIRIVYKLRKDKFHYMAVADNRQRLMPLPDDRLPGRGKELVPPEAVLLVNPIEPEFLGEVDDKYQYSSENIDLKVHGWISTESETNPATGFWVIIPSNEFRSGGFVKQNLTSHVGPISLAMFLSAHYAGEDIVLKLQPNEPWKKVFGPTFVYLNNLLDHEDPLAHLWEDAKFQMNKEVQSWPYDFPASDNFQKTSQRGSVCGTLLVRDRCVSDKDIIAQGAYVGLAPPGDAGSWQRECKGYQFWSRANEEGYFSINNIQSGDYNLYAWIPGFIGEYWNNVVLKITSGCEINVGDIVFEPPRDGPTLWEIGIPDRSAAEFYVPDPNPKFINKLFIDHPDKFRQYGLWERYAELYPNEDLIYNVGVSDYTKDWFYAQVTRKKNDGSYQGTAWQIKFNMDDVQQNGLYKLRLALASANVSELQVRVNDVKQDPPLFTTGVIGKDNAIARHGIHGLYWLFNIGVPSILLSKGDNTIFLTQTMATGPLALFQGIMYDYIRLESPN 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01650 643 Coils Coil 552 572 - -
Mepo7g01650 643 Gene3D - 446 640 - -
Mepo7g01650 643 CDD RGL4_C 450 640 - -
Mepo7g01650 643 SUPERFAMILY Galactose-binding domain-like 445 640 IPR008979 -
Mepo7g01650 643 Pfam Polysaccharide lyase family 4, domain II 362 434 IPR029413 -
Mepo7g01650 643 FunFam Rhamnogalacturonate lyase B 336 435 - -
Mepo7g01650 643 CDD RGL4_N 12 297 - -
Mepo7g01650 643 Pfam Polysaccharide lyase family 4, domain III 448 639 IPR029411 -
Mepo7g01650 643 Pfam Rhamnogalacturonate lyase family 4 203 IPR010325 -
Mepo7g01650 643 Gene3D - 5 278 IPR014718 GO:0030246
Mepo7g01650 643 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 642 - -
Mepo7g01650 643 SUPERFAMILY Starch-binding domain-like 338 426 IPR013784 GO:0030246
Mepo7g01650 643 CDD RGL4_M 339 438 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01650 Mepo-Chr7 25838198 25844446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01650 1 643 Polysaccharide Lyase AT1G09890 64.230 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01650 K18195 - gmx:100815677 1150.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01650 7 25838198 25844446 Mepo7g01650 7 25838198 25844446 ECH