Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01642 ATGGAACCACCAATGTACGAACACTCTCAACCTTTGAACACCACCGTACCAATCACCGCCGGCGAAAGCGACGACGGTTCCGGCCCTGACGCCGGCGTCGATGCCCAAATTCAGTACGAAACTCACCCACTCGATGATTCCAACTCCGATGCTGTTTACGGCAACGGCGGCGAAAATCCTGAATTCGCACTTCAAAGTTTTGAGGAATCTGATCAGCTTACGCTGTCGTTTCGTGGTCAAGTTTATGTCTTTGATTCTGTTACGCCGGCTAAGGTTCAATCGGTGTTGTTACTGTTGGGTGGATGTGAACAACCTGATGCTGGTGTGAATGCAGTGCCTCAACAAAGTTTGAGGGTGGAATCAATGGATTTTCCTACAAAATATAGTCAACTACATCGAGAAGCCTCATTACTTAGGTTCCGGCAGAAGAGGAAAGAAAGATGCTTTGATAAGAAAGTTAGATATGAAGTACGTCAAGAAGTTGCACTCAGGATGCAGCGAAAGAAGGGTCAATTTACTACATCTAAGAAACAAGATGGGTCCAATAGTTGTGGTACAGACCAGGATTCTAGTCAGGATGCCAGTCCATCAGAAATCTCTTGCACACATTGTGGCACAAGCTCAAAATCGACCCCAATGATGCGGCGAGGGCCATCTGGTCCAAGGTCACTTTGCAATGCTTGTGGGCTTTTCTGGGCAAATAGGGGTGTCTTGAGAGACCTTTCCAAGAGACATCAGGAATTATCTACTGTACCAGTTGAGCAGGTTGATCAAGGTAACAGCTCAGACTGCGGAAATGCAACTATCCCTGCACACAACATCACCCCTATTGAGCAACCATCTACTATTTGCTAG 855 0.4678 MEPPMYEHSQPLNTTVPITAGESDDGSGPDAGVDAQIQYETHPLDDSNSDAVYGNGGENPEFALQSFEESDQLTLSFRGQVYVFDSVTPAKVQSVLLLLGGCEQPDAGVNAVPQQSLRVESMDFPTKYSQLHREASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKKGQFTTSKKQDGSNSCGTDQDSSQDASPSEISCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGVLRDLSKRHQELSTVPVEQVDQGNSSDCGNATIPAHNITPIEQPSTIC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01642 284 MobiDBLite consensus disorder prediction 1 37 - -
Mepo7g01642 284 SMART GATA_3 195 248 IPR000679 GO:0006355|GO:0043565
Mepo7g01642 284 ProSiteProfiles Tify domain profile. 66 101 IPR010399 -
Mepo7g01642 284 MobiDBLite consensus disorder prediction 175 214 - -
Mepo7g01642 284 SMART tify_2 66 101 IPR010399 -
Mepo7g01642 284 MobiDBLite consensus disorder prediction 167 219 - -
Mepo7g01642 284 CDD ZnF_GATA 200 244 IPR000679 GO:0006355|GO:0043565
Mepo7g01642 284 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 197 252 - -
Mepo7g01642 284 Pfam tify domain 69 100 IPR010399 -
Mepo7g01642 284 Gene3D - 190 251 IPR013088 GO:0006355|GO:0008270
Mepo7g01642 284 ProSiteProfiles GATA-type zinc finger domain profile. 195 251 IPR000679 GO:0006355|GO:0043565
Mepo7g01642 284 Pfam CCT motif 133 174 IPR010402 GO:0005515
Mepo7g01642 284 ProSitePatterns GATA-type zinc finger domain. 201 228 IPR000679 GO:0006355|GO:0043565
Mepo7g01642 284 PANTHER GATA TRANSCRIPTION FACTOR 28 22 255 IPR045280 GO:0006355
Mepo7g01642 284 Pfam GATA zinc finger 201 237 IPR000679 GO:0006355|GO:0043565
Mepo7g01642 284 ProSiteProfiles CCT domain profile. 133 175 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01642 Mepo-Chr7 25689857 25695959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01642 68 247 Tify Gene Family AT4G24470 62.637 7.69e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo7g01642 CCT 6.3e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01642 - - pvu:PHAVU_008G182900g 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01642 7 25689857 25695959 Mepo7g01642 7 25689857 25695959 ECH
Mepo7g01642 7 25689857 25695959 Mepo3g07045 3 84059832 84065612 PCT