Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01629 ATGGGTGGTGCACCTTCTTTCAATCCATGCAGCGTCACATTTTTTCCCTTCTTCCCCATCATCGTTGTCACCGTCACCACCACACTCATTCTAATCGCAAGCGCCGAAAATCACAATTCAAAAGAAAATGAAGCAATTCCTAGTCTCGAAGATGACAATGGCGCCACCACGTCATCCCCACCACCACCGGTATCATCAAGCGAGAGCTCCAATGATAGGGAGAGGAACTCTGTTGCCTTCAAACCTAGCACTGCAGTGATAGTAGGCGTTTTAACAACCACATTTTTCCTCGTGTTGCTACTCCTCCTCTACGCCAAACACTGCAACGGTGCAAATATGCCCGTTGCTAGCAACGCGAATCCCAATGGAGAATCACATTTGCATAAGAGGAAAAACTCTGGAATCGAACGCACGGTTGTGGAATCATTGCCGGTTTTTAAGTTTGGGTCATTGACAGGCCAAAAAAATGGACTCGAATGTGCAGTTTGTCTCAACGGGTTTGAGGATCCCGAGGTACTTAGGTTATTGCCAAAATGCAAACATGCTTTCCACATGGAATGTGTTGACATGTGGCTTGATGAACATTCCTCGTGCCCGTTGTGTCGCTATAAGGTGAACCCTGATGACATTGTTCTTCCTCAACGACAAAACACTGAGGAAGAATCATTGTCATCAAACATCGAACGAGGTAATAATATTAACGACAATGTGCCACAACATGAAAATGAAAATGTAGGTTCACAACAAGTGTCTTCAATGGAAGAGAGGGACAGTGGTTTGTTACAAATAAATGCTTTGGAGAATAACGAAGTATCACCATTTAGGAGGTCTTTCGATAGTAATAATTCTAGAAATACAAGGAGTGAGGGTGTCATTGGAGAACATAGGTTAGATCACCAAATAATTTTGTCCCCTACTTATAATTCACATAGTAGGGTCCACCAACGATCGATCAATTCTAAATCGTGTGACATGCTTTACTTAACATTTGATGGGATCATTAGTGAGGGTTCCTCTTCACAGTTGAACATCACACATAGGGGAAGGAGAACAATGGTCGAGCGTAATCGTGATATTCTTGATGATGAGATAGAAAATGGTTTTGGTGGTGGTGGGAGGGGTGAAAGGAATTTGAGGACCGTCTCGGACATGGCAGGAATGAGTAAGTTTTTGAGTAGGGAGATAGGGAGGGAAAGAGAACGTGGTGGTGGTCGACTAGAACAAGAGAGGCAACGTGAGGGAGTTGCATCGAGGTGGTTTGCTTGGATTTCTGGGTCAAAATCAAAAAGAGCAACTTCTGAATGA 1305 0.4375 MGGAPSFNPCSVTFFPFFPIIVVTVTTTLILIASAENHNSKENEAIPSLEDDNGATTSSPPPPVSSSESSNDRERNSVAFKPSTAVIVGVLTTTFFLVLLLLLYAKHCNGANMPVASNANPNGESHLHKRKNSGIERTVVESLPVFKFGSLTGQKNGLECAVCLNGFEDPEVLRLLPKCKHAFHMECVDMWLDEHSSCPLCRYKVNPDDIVLPQRQNTEEESLSSNIERGNNINDNVPQHENENVGSQQVSSMEERDSGLLQINALENNEVSPFRRSFDSNNSRNTRSEGVIGEHRLDHQIILSPTYNSHSRVHQRSINSKSCDMLYLTFDGIISEGSSSQLNITHRGRRTMVERNRDILDDEIENGFGGGGRGERNLRTVSDMAGMSKFLSREIGRERERGGGRLEQERQREGVASRWFAWISGSKSKRATSE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01629 434 MobiDBLite consensus disorder prediction 217 240 - -
Mepo7g01629 434 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Mepo7g01629 434 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 62 424 - -
Mepo7g01629 434 SMART ring_2 160 201 IPR001841 -
Mepo7g01629 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 209 IPR013083 -
Mepo7g01629 434 MobiDBLite consensus disorder prediction 42 75 - -
Mepo7g01629 434 CDD RING-H2_EL5-like 159 202 - -
Mepo7g01629 434 FunFam RING-H2 finger protein ATL43 135 209 - -
Mepo7g01629 434 SUPERFAMILY RING/U-box 140 208 - -
Mepo7g01629 434 Pfam Ring finger domain 159 202 IPR001841 -
Mepo7g01629 434 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01629 Mepo-Chr7 25570100 25571404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01629 48 422 C3H Transcription Factor Family AT5G05810 37.470 8.43e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01629 K19041 - mtr:11437137 699.123