Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01627 ATGGCGAGGCAGAAGATAAAGATAAAGAAAATAGACAATGCAACTGCAAGGCAAGTGACGTTTTCGAAGAGAAGAAGAGGGATCTTCAAGAAAGCTGAGGAGCTTTCGATTTTGTGTGATGCTGAAGTTGGTCTTGTTATTTTCTCAACAACTGGGAAACTCTATGAATATGCCAGTTCCAATATGAAGGGCATAATTACAAGGTATGATCAGCAGTCCCACCACATCACCAAATTGGATAAACCTCTGCAAGTGCAGGTAGAAAAAAACATGCCAACTGAATTGTATAAGGAAGTTGCTGATACAACCCAACAACTAAGGGGGATGAAGAGTGAGGATTTTGAAGGGTTAAACTTAGAGGGGTTGCAGCAATTGGAGAAAACCCTTGAATCAGGACTCAAGCGTGTGATTGAAATGAAGGAAAAGAAGATTCTTAATGAAATTGGGGCACTTCGAATGAAGGAAATCATGTTAGAAGAGGAGAACAAGCATTTAAAGCAAAAGATGGCTATGTTAAGTATGGGAAAAAGTCCTATCTTCGGGGACTCAGATATTACCATGCAAGAAAATGTCTCAGCTGAGTCCATGAATAATGTAAGCAGCTGTAATAGTGGCCTTTCTCTTGAAGATGATTCCTCTGACACATCTCTTAAGTTAGGGTTACCATTTCCTAATTGA 678 0.3968 MARQKIKIKKIDNATARQVTFSKRRRGIFKKAEELSILCDAEVGLVIFSTTGKLYEYASSNMKGIITRYDQQSHHITKLDKPLQVQVEKNMPTELYKEVADTTQQLRGMKSEDFEGLNLEGLQQLEKTLESGLKRVIEMKEKKILNEIGALRMKEIMLEEENKHLKQKMAMLSMGKSPIFGDSDITMQENVSAESMNNVSSCNSGLSLEDDSSDTSLKLGLPFPN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01627 225 Gene3D - 13 83 IPR036879 GO:0003677|GO:0046983
Mepo7g01627 225 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 SUPERFAMILY SRF-like 3 75 IPR036879 GO:0003677|GO:0046983
Mepo7g01627 225 CDD MADS_MEF2_like 2 74 IPR033896 GO:0000977|GO:0045944
Mepo7g01627 225 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 183 - -
Mepo7g01627 225 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mepo7g01627 225 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Mepo7g01627 225 FunFam Transcription factor, MADS-box 13 83 - -
Mepo7g01627 225 Coils Coil 122 142 - -
Mepo7g01627 225 Pfam K-box region 89 169 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mepo7g01627 225 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01627 Mepo-Chr7 25520421 25542559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01627 1 223 MADS-box Gene Family AT2G22540 48.954 8.46e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mepo7g01627 K-box 3.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01627 - - rcu:8268411 255.373