Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g01623 ATGCTTCCTCCTTTAAGAAGATTCTACGGGTTTGAGAGCTGGATGGATAATAAAGAGTTAAAGGAAATCAACTGTGATAAATCAAAATCGGAGAGAAAATCAAAAGAAGCATGCAAGAGTCATAGGGAAGCTGAAAGGAGACGCAGACAAAGAATCAACGCTCATCTCAACACTCTCCGTTCTCTCCTCCCTAACACCACAAAGTCAGATAAGGCGTCGTTGCTAGCGGAAGTGGTGCAACACGTGAAACGGTTGAAGAAGGAAGCCGATGAAATGGCAAATCTTCACAATGACGGAGAGTCGTCCTATTCATGCAGCGGAGAACCTGGTTCAGTTAATTCTACAGAGGTAGCTGAGACATGGCCGTTTCCAGGAGAATCAGACGAGGCGATAGTCAGTTATTGTGGCAGAGAGGAAGGAGAACCACGGAGGATGAAAGTGACAGTGTGTTGTGAGGACAGACCGGGTCTGAACCATGATTTAACACAAGCAATCCGGTCGGTTCTGGCGAAACCAGTTCGAGCAGAGATGATGACGGTTGGTGGTAGGACAAAGAGTGTTGTGGTGGTGGAGTGGCCTAAAGGTGAAGGTGGTGATGATGGAAGAGAGGAGAAGGAGGTTGAAGCTTTGGAAAGGGGTTTGAAAGCTGTTATAGAGAATCGGGCTTTTGTTGATTCTGGGATGGGCCCGATTTTGTTGGGCCGGAAACGGGCTCGTGAGGTTGACTGTTCCTTGTTGTTGAGGAATGAGGAGTTTTGCTAA 762 0.4724 MLPPLRRFYGFESWMDNKELKEINCDKSKSERKSKEACKSHREAERRRRQRINAHLNTLRSLLPNTTKSDKASLLAEVVQHVKRLKKEADEMANLHNDGESSYSCSGEPGSVNSTEVAETWPFPGESDEAIVSYCGREEGEPRRMKVTVCCEDRPGLNHDLTQAIRSVLAKPVRAEMMTVGGRTKSVVVVEWPKGEGGDDGREEKEVEALERGLKAVIENRAFVDSGMGPILLGRKRAREVDCSLLLRNEEFC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g01623 253 Coils Coil 75 95 - -
Mepo7g01623 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 96 IPR036638 GO:0046983
Mepo7g01623 253 SUPERFAMILY ACT-like 144 213 IPR045865 -
Mepo7g01623 253 Pfam Helix-loop-helix DNA-binding domain 38 85 IPR011598 GO:0046983
Mepo7g01623 253 Gene3D - 141 222 - -
Mepo7g01623 253 MobiDBLite consensus disorder prediction 25 48 - -
Mepo7g01623 253 Gene3D - 29 97 IPR036638 GO:0046983
Mepo7g01623 253 PANTHER TRANSCRIPTION FACTOR BHLH30 26 239 IPR045847 GO:0003700|GO:0006355
Mepo7g01623 253 MobiDBLite consensus disorder prediction 97 115 - -
Mepo7g01623 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 85 IPR011598 GO:0046983
Mepo7g01623 253 SMART finulus 42 91 IPR011598 GO:0046983
Mepo7g01623 253 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g01623 Mepo-Chr7 25465474 25466407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g01623 33 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 36.585 5.98e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo7g01623 HLH 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g01623 - - psat:127118672 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g01623 7 25465474 25466407 Mepo7g01623 7 25465474 25466407 ECH